DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oct-TyrR and dop-4

DIOPT Version :10

Sequence 1:NP_524419.2 Gene:Oct-TyrR / 42452 FlyBaseID:FBgn0004514 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_508238.2 Gene:dop-4 / 183715 WormBaseID:WBGene00016872 Length:517 Species:Caenorhabditis elegans


Alignment Length:551 Identity:166/551 - (30%)
Similarity:261/551 - (47%) Gaps:108/551 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 TVTAALSTAQADKDSAGECEGAVEELHASILGLQLAVPEWEALLTALVLSVIIVLTIIGNILVIL 132
            |:|.::||   :.|:.   ..|.||..|.:         |...|.|:.|..|.:||:.||.||::
 Worm    16 TMTPSVST---ENDTT---VWATEEPAAIV---------WRHPLLAIALFSICLLTVAGNCLVVI 65

  Fly   133 SVFTYKPLRIVQNFFIVSLAVADLTVALLVLPFNVAYSILGR-WEFGIHLCKLWLTCDVLCCTSS 196
            :|.|.|.||....:.|:|||:|||.|.::|:|.|..:.|... |.||:.:|.::...|:|..|:|
 Worm    66 AVCTKKYLRNPTGYLIISLAIADLIVGVIVMPMNSLFEIANHTWLFGLMMCDVFHAMDILASTAS 130

  Fly   197 ILNLCAIALDRYWAITDPINYAQKRTVGRVLLLISGVWLLSLLISSPPLIGW-NDWPDEFTSATP 260
            |.|||.|:||||.|..|||.|..|.:..|:|:.|..||:||.::|.|.:|.| ...|..:...:.
 Worm   131 IWNLCVISLDRYMAGQDPIGYRDKVSKRRILMAILSVWVLSAILSFPGIIWWRTSSPHLYEDQSQ 195

  Fly   261 CELTSQRGYVIYSSLGSFFIPLAIMTIVYIEIF-VATRRRLRERARANKLNTIALK-------ST 317
            |..|..:.||.:|||.||:|||.::...|.::: :|||   ..:.....:.|:::|       :|
 Worm   196 CLFTDSKMYVSFSSLVSFYIPLFLILFAYGKVYIIATR---HSKGMRMGIKTVSIKKRNGKKSNT 257

  Fly   318 ELEPMANS--SPVAASNSGSKSRLLASWLCCGRDRAQFATPMIQNDQESISSETHQPQDSSKAGP 380
            |.|.:.:|  .|....:.| :.:..:|.|...|..|:.:|.::.. |.|..|       .:..|.
 Worm   258 ETESILSSENEPTLRIHFG-RGKQSSSSLRNSRFHARESTRLLLK-QVSCKS-------LNDRGE 313

  Fly   381 HGNSDPQQQHVVVLVKKSRRAKTKDSIKHGKTRG--GRKSQSSSTCEPHGEQQLLPAGGDGGSCQ 443
            |.|::..:|.::    :.......|||.....|.  ||.....|.|.                  
 Worm   314 HNNNNTVRQPLL----RGTEGCHSDSISRSSQRNFRGRNVTIGSNCS------------------ 356

  Fly   444 PGGGHSGGGKSDAEISTESGSDPKGCIQVCVTQADEQTSLKLTPPQSSTGVAAVSVTPLQKKTSG 508
                           ||             :.|.|:...:.|     |:....|..:||..:.. 
 Worm   357 ---------------ST-------------LLQVDQPDRMSL-----SSNSQMVMTSPLSTRRK- 387

  Fly   509 VNQFIEEKQKISLSKERRAARTLGIIMGVFVICWLPFFLMYVILPFCQTCCPTNKFKN------F 567
            :|...:.:|.:....|:||||||.|::|.|::||.|||:...:..||::|     |.|      |
 Worm   388 LNVREKSRQMMRYVHEQRAARTLSIVVGAFILCWTPFFVFTPLTAFCESC-----FSNKETIFTF 447

  Fly   568 ITWLGYINSGLNPVIYTIFNLDYRRAFKRLL 598
            :||.|::||.|||:||:.|:.|:|||||::|
 Worm   448 VTWAGHLNSMLNPLIYSRFSRDFRRAFKQIL 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oct-TyrRNP_524419.2 7tmA_tyramine_octopamine_R-like 110..>294 CDD:320188 75/186 (40%)
TM helix 1 111..137 CDD:320188 11/25 (44%)
TM helix 2 144..170 CDD:320188 11/25 (44%)
TM helix 3 182..212 CDD:320188 15/29 (52%)
TM helix 4 224..247 CDD:320188 9/22 (41%)
TM helix 5 266..294 CDD:320188 11/28 (39%)
7tm_GPCRs <519..594 CDD:475119 35/80 (44%)
TM helix 6 528..550 CDD:410628 12/21 (57%)
TM helix 7 562..587 CDD:410628 13/30 (43%)
dop-4NP_508238.2 7tmA_Dop1R2-like 44..474 CDD:320195 152/502 (30%)
TM helix 1 44..70 CDD:320195 11/25 (44%)
TM helix 2 77..103 CDD:320195 11/25 (44%)
TM helix 3 116..146 CDD:320195 15/29 (52%)
TM helix 4 158..180 CDD:320195 9/21 (43%)
TM helix 5 201..230 CDD:320195 11/28 (39%)
TM helix 6 401..431 CDD:320195 15/29 (52%)
TM helix 7 442..467 CDD:320195 11/24 (46%)

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