DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oct-TyrR and Htr6

DIOPT Version :10

Sequence 1:NP_524419.2 Gene:Oct-TyrR / 42452 FlyBaseID:FBgn0004514 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_067333.1 Gene:Htr6 / 15565 MGIID:1196627 Length:440 Species:Mus musculus


Alignment Length:488 Identity:125/488 - (25%)
Similarity:181/488 - (37%) Gaps:182/488 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 ALVLSVIIVLTIIGNILVILSVFTYKPLRIVQNFFIVSLAVADLTVALLVLPFNVAYSILGRWEF 177
            |..|.|:||||...|.|:|..:.|...||...|||:|||..:||.|.|:|:|..:..::.|||..
Mouse    30 AAALCVVIVLTAAANSLLIALICTQPALRNTSNFFLVSLFTSDLMVGLVVMPPAMLNALYGRWVL 94

  Fly   178 GIHLCKLWLTCDVLCCTSSILNLCAIALDRYWAITDPINYAQKRTVGRVLLLISGVWLLSLLIS- 241
            ...||.||...||:||::||||||.|:||||..|..|:.|..:.|..|.|.||.|.|.|:.|.| 
Mouse    95 ARGLCLLWTAFDVMCCSASILNLCLISLDRYLLILSPLRYKLRMTAPRALALILGAWSLAALASF 159

  Fly   242 SPPLIGWNDWPDEFTSAT-PCELTSQRGYVIYSSLGSFFIPLAIMTIVYIEIFVATRRRLRERAR 305
            .|.|:||::.....|||. .|.|.:...||:.:|..:||:|...:...|..|.:|.|::      
Mouse   160 LPLLLGWHELGKARTSAPGQCRLLASLPYVLVASGVTFFLPSGAICFTYCRILLAARKQ------ 218

  Fly   306 ANKLNTIALKSTELEPMANSSPVAASNSGSKSRLLASWLCCGRDRAQFATPMIQNDQESISSETH 370
                               :..||:..:|:.:        .|:                 :.||.
Mouse   219 -------------------AVQVASLTTGTAT--------AGQ-----------------ALETL 239

  Fly   371 QPQDSSKAGPHGNSDPQQQHVVVLVKKSRRAKTKDSIKHGKTRGGRKSQSSSTCEPHGEQQLLPA 435
            |...:.:.|.. ::|            |||..||.|                             
Mouse   240 QVPRTPRPGME-SAD------------SRRLTTKHS----------------------------- 262

  Fly   436 GGDGGSCQPGGGHSGGGKSDAEISTESGSDPKGCIQVCVTQADEQTSLKLTPPQSSTGVAAVSVT 500
                                                                             
Mouse   263 ----------------------------------------------------------------- 262

  Fly   501 PLQKKTSGVNQFIEEKQKISLSKERRAARTLGIIMGVFVICWLPFFLMYVILPFCQTCCPTNKFK 565
                                 .|..:|:.||||::.:|.:.|||||:..:....|. |.....| 
Mouse   263 ---------------------RKALKASLTLGILLSMFFVTWLPFFVASIAQAVCD-CISPGLF- 304

  Fly   566 NFITWLGYINSGLNPVIYTIFNLDYRRAFKRLL 598
            :.:|||||.||.:||:||.:|..|::||..|.:
Mouse   305 DVLTWLGYCNSTMNPIIYPLFMRDFKRALGRFV 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oct-TyrRNP_524419.2 7tmA_tyramine_octopamine_R-like 110..>294 CDD:320188 77/182 (42%)
TM helix 1 111..137 CDD:320188 10/23 (43%)
TM helix 2 144..170 CDD:320188 12/25 (48%)
TM helix 3 182..212 CDD:320188 18/29 (62%)
TM helix 4 224..247 CDD:320188 11/23 (48%)
TM helix 5 266..294 CDD:320188 8/27 (30%)
7tm_GPCRs <519..594 CDD:475119 29/74 (39%)
TM helix 6 528..550 CDD:410628 10/21 (48%)
TM helix 7 562..587 CDD:410628 12/24 (50%)
Htr6NP_067333.1 7tmA_5-HT6 29..333 CDD:320182 123/482 (26%)
TM helix 1 29..54 CDD:320182 10/23 (43%)
TM helix 2 61..87 CDD:320182 12/25 (48%)
TM helix 3 99..129 CDD:320182 18/29 (62%)
TM helix 4 141..164 CDD:320182 10/22 (45%)
TM helix 5 185..214 CDD:320182 8/28 (29%)
TM helix 6 263..293 CDD:320182 12/29 (41%)
TM helix 7 301..326 CDD:320182 12/25 (48%)

Return to query results.
Submit another query.