DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oct-TyrR and Htr5a

DIOPT Version :10

Sequence 1:NP_524419.2 Gene:Oct-TyrR / 42452 FlyBaseID:FBgn0004514 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_032340.2 Gene:Htr5a / 15563 MGIID:96283 Length:357 Species:Mus musculus


Alignment Length:490 Identity:125/490 - (25%)
Similarity:197/490 - (40%) Gaps:193/490 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 IIVLTIIG---------NILVILSVFTYKPLRIVQNFFIVSLAVADLTVALLVLPFNVAYSILG- 173
            ::|||::|         |:||:.::...:....|.:..:.|:|::|:.||:||:|.::.:.:.| 
Mouse    41 VLVLTLLGFLAAATFTWNLLVLATILKVRTFHRVPHNLVASMAISDVLVAVLVMPLSLVHELSGR 105

  Fly   174 RWEFGIHLCKLWLTCDVLCCTSSILNLCAIALDRYWAITDPINYA--QKRTVGRVLLLISGVWLL 236
            ||:.|..||:||:.|||||||:||.|:.||||||||:||..:.|.  .::.|..|::|::  |.|
Mouse   106 RWQLGRRLCQLWIACDVLCCTASIWNVTAIALDRYWSITRHLEYTLRTRKRVSNVMILLT--WAL 168

  Fly   237 SLLISSPPLI-GWNDWPDEFTSATPCELTSQRGYVIYSSLGSFFIPLAIMTIVYIEIFVATRRRL 300
            |.:||..||: ||.:...|  .:..|:::.:..|.::|::|:|::||.::..||.:|:.|.:.|:
Mouse   169 STVISLAPLLFGWGETYSE--PSEECQVSREPSYTVFSTVGAFYLPLCVVLFVYWKIYRAAKFRM 231

  Fly   301 RERARANKLNTIALKSTELEPMANSSPVAASNSGSKSRLLASWLCCGRDRAQFATPMIQNDQESI 365
            ..|    |.|::             |||                                     
Mouse   232 GSR----KTNSV-------------SPV------------------------------------- 242

  Fly   366 SSETHQPQDSSKAGPHGNSDPQQQHVVVLVKKSRRAKTKDSIKHGKTRGGRKSQSSSTCEPHGEQ 430
                                |:...|            |::.:|                     
Mouse   243 --------------------PEAVEV------------KNATQH--------------------- 254

  Fly   431 QLLPAGGDGGSCQPGGGHSGGGKSDAEISTESGSDPKGCIQVCVTQADEQTSLKLTPPQSSTGVA 495
                                                                     ||....|.
Mouse   255 ---------------------------------------------------------PQMVFTVR 262

  Fly   496 AVSVTPLQKKTSGVNQFIEEKQKISLSKERRAARTLGIIMGVFVICWLPFFLMYVILPFCQTCCP 560
            ..:||           |..|.......||:|||..:||::||||:||.|||:..:|.|.|....|
Mouse   263 HATVT-----------FQTEGDTWREQKEQRAALMVGILIGVFVLCWFPFFVTELISPLCSWDVP 316

  Fly   561 TNKFKNFITWLGYINSGLNPVIYTIFNLDYRRAFK 595
            . .:|:...||||.||..||:|||.||..|..|||
Mouse   317 A-IWKSIFLWLGYSNSFFNPLIYTAFNRSYSSAFK 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oct-TyrRNP_524419.2 7tmA_tyramine_octopamine_R-like 110..>294 CDD:320188 68/187 (36%)
TM helix 1 111..137 CDD:320188 7/26 (27%)
TM helix 2 144..170 CDD:320188 8/25 (32%)
TM helix 3 182..212 CDD:320188 21/29 (72%)
TM helix 4 224..247 CDD:320188 9/23 (39%)
TM helix 5 266..294 CDD:320188 9/27 (33%)
7tm_GPCRs <519..594 CDD:475119 35/74 (47%)
TM helix 6 528..550 CDD:410628 12/21 (57%)
TM helix 7 562..587 CDD:410628 12/24 (50%)
Htr5aNP_032340.2 7tm_GPCRs 41..349 CDD:475119 122/487 (25%)
TM helix 1 43..67 CDD:410628 7/23 (30%)
TM helix 2 76..98 CDD:410628 8/21 (38%)
TM helix 3 115..137 CDD:410628 14/21 (67%)
TM helix 4 160..176 CDD:410628 7/17 (41%)
TM helix 5 198..221 CDD:410628 7/22 (32%)
TM helix 6 284..306 CDD:410628 12/21 (57%)
TM helix 7 317..342 CDD:410628 12/25 (48%)

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