DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oct-TyrR and Htr1d

DIOPT Version :10

Sequence 1:NP_524419.2 Gene:Oct-TyrR / 42452 FlyBaseID:FBgn0004514 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_032335.2 Gene:Htr1d / 15552 MGIID:96276 Length:374 Species:Mus musculus


Alignment Length:529 Identity:156/529 - (29%)
Similarity:230/529 - (43%) Gaps:186/529 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 EGAVEELHASILGLQLAVPEWE-ALLTAL------VLSVIIVLTIIGNILVILSVFTYKPLRIVQ 144
            ||..:|.....|.:..|   |: .:|.||      |||||.:.|::.|..|:.::...|.|....
Mouse     9 EGLPQEASNRSLNVTGA---WDPEVLQALRISLVVVLSVITLATVLSNAFVLTTILLTKKLHTPA 70

  Fly   145 NFFIVSLAVADLTVALLVLPFNVAYSILGRWEFGIHLCKLWLTCDVLCCTSSILNLCAIALDRYW 209
            |:.|.|||..||.|::||:|.::||:....|.||..||.:|::.|:.|||:|||:||.|||||||
Mouse    71 NYLIGSLATTDLLVSILVMPISIAYTTTRTWNFGQILCDIWVSSDITCCTASILHLCVIALDRYW 135

  Fly   210 AITDPINYAQKRTVGRVLLLISGVWLLSLLISSPPLIGWNDWPDEFTSATPCE-------LTSQR 267
            ||||.:.|:::||.|....:|:.||::|:.||.|||. |.       .||..|       .|||.
Mouse   136 AITDALEYSKRRTAGHAAAMIAAVWIISICISIPPLF-WR-------QATAHEEMSDCLVNTSQI 192

  Fly   268 GYVIYSSLGSFFIPLAIMTIVYIEIFVATRRRLRERARANKLNTIALKSTELEPMANSSPVAASN 332
            .|.|||:.|:|:||..::.|:|..|:||.|.|:        ||..:|.....    .::.:...:
Mouse   193 SYTIYSTCGAFYIPSILLIILYGRIYVAARSRI--------LNPPSLYGKRF----TTAQLITGS 245

  Fly   333 SGSKSRLLASWLCCGRDRAQFATPMIQNDQESISSETHQPQDSSKAGPHGNSDPQQQHVVVLVKK 397
            :||.       ||                  |::...|                           
Mouse   246 AGSS-------LC------------------SLNPSLH--------------------------- 258

  Fly   398 SRRAKTKDSIKHGKTRGGRKSQSSSTCEPHGEQQLLPAGGDGGSCQPGGGHSGGGKSDAEISTES 462
                                       |.|                                |.:
Mouse   259 ---------------------------ESH--------------------------------THT 264

  Fly   463 GSDPKGCIQVCVTQADEQTSLKLTPPQSSTGVAAVSVTPLQKKTSGVNQFIEEKQKISLSKERRA 527
            ...|....||.:..||.                                 |.|:::||.::||:|
Mouse   265 VGSPLFFNQVKIKLADS---------------------------------ILERKRISAARERKA 296

  Fly   528 ARTLGIIMGVFVICWLPFFLMYVILPFCQTCC---PTNKFKNFITWLGYINSGLNPVIYTIFNLD 589
            .:|||||:|.|:|||||||::.::||.|:..|   |.  ..:|.|||||:||.:||||||:||.|
Mouse   297 TKTLGIILGAFIICWLPFFVVSLVLPICRDSCWIHPA--LFDFFTWLGYLNSLINPVIYTVFNED 359

  Fly   590 YRRAFKRLL 598
            :|:||::::
Mouse   360 FRQAFQKVV 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oct-TyrRNP_524419.2 7tmA_tyramine_octopamine_R-like 110..>294 CDD:320188 83/196 (42%)
TM helix 1 111..137 CDD:320188 11/31 (35%)
TM helix 2 144..170 CDD:320188 12/25 (48%)
TM helix 3 182..212 CDD:320188 19/29 (66%)
TM helix 4 224..247 CDD:320188 10/22 (45%)
TM helix 5 266..294 CDD:320188 12/27 (44%)
7tm_GPCRs <519..594 CDD:475119 42/77 (55%)
TM helix 6 528..550 CDD:410628 14/21 (67%)
TM helix 7 562..587 CDD:410628 14/24 (58%)
Htr1dNP_032335.2 7tm_GPCRs 32..364 CDD:475119 147/497 (30%)
TM helix 1 38..62 CDD:320455 8/23 (35%)
TM helix 2 71..93 CDD:320455 11/21 (52%)
TM helix 3 109..131 CDD:320455 11/21 (52%)
DRY motif, important for ligand-induced conformation changes. /evidence=ECO:0000250|UniProtKB:P41595 132..134 1/1 (100%)
TM helix 4 154..170 CDD:320455 6/15 (40%)
TM helix 5 192..215 CDD:320455 9/22 (41%)
TM helix 6 297..319 CDD:320455 14/21 (67%)
TM helix 7 332..357 CDD:320455 15/26 (58%)
NPxxY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250|UniProtKB:P41595 349..353 3/3 (100%)

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