DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oct-TyrR and 5-HT2A

DIOPT Version :10

Sequence 1:NP_524419.2 Gene:Oct-TyrR / 42452 FlyBaseID:FBgn0004514 Length:601 Species:Drosophila melanogaster
Sequence 2:XP_061500179.1 Gene:5-HT2A / 1269329 VectorBaseID:AGAMI1_010455 Length:825 Species:Anopheles gambiae


Alignment Length:660 Identity:185/660 - (28%)
Similarity:279/660 - (42%) Gaps:159/660 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SADQILFVNVTTTVAAAALTAAAA---VSTTKSGSGNAARGYTDSDDDAG--MGTEAVANISGSL 62
            :|.|.|......|.|..:.||.|.   |.:.:...||.:   |:|...||  ..::|...:|.||
Mosquito   194 NASQALLDAERPTPAQPSQTARAVPGPVQSVRLVCGNVS---TESPLAAGSLFESDAFELVSVSL 255

  Fly    63 VEGLTT-VTAALSTAQADKDSAGECEGAVEELHASILG---LQL---------AVP---EWEALL 111
            :|.:.. :...|..|..   |.....||.....|::.|   .||         ..|   ||..|.
Mosquito   256 LEPIQCWMNVELRNALV---SPTWLNGAEHHAVAALAGWNQTQLLGELPAGGDTAPGRYEWSFLF 317

  Fly   112 TALVLSVIIVLTIIGNILVILSVFTYKPLRIVQNFFIVSLAVADLTVALLVLPFNVAYSILGRWE 176
            ..|    .|....:|||||.|:|...:.|:.|.|:|::|||:|||.|:|.|:|.......||.|.
Mosquito   318 VIL----FIFAGGLGNILVCLAVALDRKLQNVTNYFLLSLAIADLLVSLFVMPLGAIPGFLGYWP 378

  Fly   177 FGIHLCKLWLTCDVLCCTSSILNLCAIALDRYWAITDPI---NYAQKRTVGRVLLLISGVWLLSL 238
            ||:..|.:::|||||.|::|||::|.|:|.||..|.:|:   :::.||..|   :.|:.||||::
Mosquito   379 FGVTWCNIYVTCDVLACSASILHMCFISLGRYLGIRNPLGSRHHSTKRLTG---IKIALVWLLAM 440

  Fly   239 LISSP-PLIGWNDWPDEFTSATPCELTSQRGYVIYSSLGSFFIPLAIMTIVYIEIFVATRRRLRE 302
            |:||. .::|..:..:.......| :.:.|.:.::.||.:|:||:.:|.:.|    ..|.:.||:
Mosquito   441 LVSSSITVLGMINQNNIMPGPNEC-VINNRAFFVFGSLVAFYIPMVMMVVTY----ALTVQLLRK 500

  Fly   303 RARANKLNTIALKSTELEPMANSSPVAASNSGSKSRLLASWLCCGRDRAQFATPMIQNDQESISS 367
            :||          ..|..|           .|...|.|...|...:..        .|.|...||
Mosquito   501 KAR----------FLEQHP-----------EGELFRRLGGRLASSKHS--------NNSQSDGSS 536

  Fly   368 ETHQPQDSSKAGPHGNSDPQQ-QHVVVLVKKSRRAKTKDSIKHGKTRGGRKSQSSSTCEPHGEQQ 431
            .:::..:..|...:.|..|.. ||              ||           |..||         
Mosquito   537 TSNKAVEMRKFTVNNNKQPAYGQH--------------DS-----------SPPSS--------- 567

  Fly   432 LLPAGGDGGSCQPGGGH---SGGGKSDAEISTESG--SDP--------------KGCIQVCVTQA 477
             ||:...|.|..|...|   :|.||.|:.:|:..|  |.|              |....||    
Mosquito   568 -LPSVAAGHSALPWRWHGTTAGTGKMDSRMSSIKGSMSHPHLGYSNGGNRTMAGKRSRTVC---- 627

  Fly   478 DEQTSLKLTPPQSSTGVAAVSVTPLQK-----------KTSGVN---QFIEEKQKISLS-----K 523
            |:.|.   ||.      :....|..||           .|..:|   :|:..|::.:||     .
Mosquito   628 DQGTQ---TPD------SIERETRRQKFCSFRIHLNSVPTPAINFNLKFLGSKKRTNLSANAVAT 683

  Fly   524 ERRAARTLGIIMGVFVICWLPFFLMYVILPFCQTCCPTNKFKNFITWLGYINSGLNPVIYTIFNL 588
            |::|.:.||::...||.||.|||::.:|...........:..:...||||::|.:||:||||||.
Mosquito   684 EQKATKVLGLVFFTFVFCWAPFFILNIIFAAWPEAKVPERIVSICLWLGYVSSTINPIIYTIFNK 748

  Fly   589 DYRRAFKRLL 598
            .:|.||.|||
Mosquito   749 TFRAAFIRLL 758

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oct-TyrRNP_524419.2 7tmA_tyramine_octopamine_R-like 110..>294 CDD:320188 67/187 (36%)
TM helix 1 111..137 CDD:320188 9/25 (36%)
TM helix 2 144..170 CDD:320188 12/25 (48%)
TM helix 3 182..212 CDD:320188 15/29 (52%)
TM helix 4 224..247 CDD:320188 9/23 (39%)
TM helix 5 266..294 CDD:320188 8/27 (30%)
7tm_GPCRs <519..594 CDD:475119 28/79 (35%)
TM helix 6 528..550 CDD:410628 9/21 (43%)
TM helix 7 562..587 CDD:410628 11/24 (46%)
5-HT2AXP_061500179.1 None

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