DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oct-TyrR and htr2c

DIOPT Version :10

Sequence 1:NP_524419.2 Gene:Oct-TyrR / 42452 FlyBaseID:FBgn0004514 Length:601 Species:Drosophila melanogaster
Sequence 2:XP_017951833.1 Gene:htr2c / 100496012 XenbaseID:XB-GENE-967634 Length:475 Species:Xenopus tropicalis


Alignment Length:567 Identity:143/567 - (25%)
Similarity:216/567 - (38%) Gaps:211/567 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 SGSLVEGLTTVTAALS------------------TAQADKDSAGECEGAVEE--LHASILGLQLA 103
            :|.|| .||||:...|                  |......::.....:.||  .|.|     ||
 Frog     7 TGKLV-SLTTVSITRSVDISFHNGLMAWHVNNNVTLNQSMPTSAPANASEEEKLSHES-----LA 65

  Fly   104 VPEWEALLTALVLSVIIVLTIIGNILVILSVFTYKPLRIVQNFFIVSLAVADLTVALLVLPFNVA 168
            ...|.||||.    :||:|||.||||||::|...|.|:...|||::||||||:.|.:||:|.::.
 Frog    66 DKNWSALLTL----IIIILTIGGNILVIMAVSLEKKLQNATNFFLMSLAVADMLVGILVMPVSLV 126

  Fly   169 YSILG-RWEFGIHLCKLWLTCDVLCCTSSILNLCAIALDRYWAITDPINYAQKRTVGRVLLLISG 232
            ..:.. .|.....||.:|::.|||..|:||::||||:||||.||.:||.:::..:..:.::.|:.
 Frog   127 TILYDYAWPLPRKLCPIWISLDVLFSTASIMHLCAISLDRYVAIRNPIEHSRFNSRTKAMMKIAA 191

  Fly   233 VWLLSLLISSP-PLIGWNDWPDEFTSATPCELTSQRGYVIYSSLGSFFIPLAIMTIVY---IEIF 293
            ||.:|:.||.| |:||..|....|.::: |.|..: .:|:..|..:|||||.||...|   |::.
 Frog   192 VWTISIGISMPVPVIGLQDDSRVFVNSS-CVLNDE-NFVLLGSFVAFFIPLIIMVFTYCLTIQVL 254

  Fly   294 VATRRRLRERARANKLNTIALKSTELEPMANSSPVAASNSGSKSRLLASWLCCGRDRAQFATPMI 358
                                                                             
 Frog   255 ----------------------------------------------------------------- 254

  Fly   359 QNDQESISSETHQPQDSSKAGPHGNSDPQQQHVVVL---VKKSRRAKTKDSIKHGKTRGGRKSQS 420
                                        |:|..|.:   |.|.||:......|...|......|:
 Frog   255 ----------------------------QKQATVFMYEEVPKQRRSSVNCLKKENNTENISMIQN 291

  Fly   421 SSTCEPHGEQQLLPAGGDGGSCQPGGGHSGGGKSDAEISTESGSDPKGCIQVCVTQADEQTSLKL 485
                                       |......::.|:.|.....||.:|              
 Frog   292 ---------------------------HEAASHLNSPINKEGALFRKGTMQ-------------- 315

  Fly   486 TPPQSSTGVAAVSVTPLQKKTSGVNQFIEEKQKISLSKERRAARTLGIIMGVFVICWLPFFLMYV 550
                                              |::.||||::.|||:..:|:|.|.|||:..:
 Frog   316 ----------------------------------SINNERRASKVLGIVFFLFLIMWCPFFITNI 346

  Fly   551 ILPFCQTCCPTN---KFKNFITWLGYINSGLNPVIYTIFNLDYRRAF 594
            :...|:..|...   :..|...|:||::||:||::||:||..|||||
 Frog   347 MSVLCKEACDNELMVELLNVFVWVGYVSSGINPLVYTLFNRTYRRAF 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oct-TyrRNP_524419.2 7tmA_tyramine_octopamine_R-like 110..>294 CDD:320188 77/188 (41%)
TM helix 1 111..137 CDD:320188 14/25 (56%)
TM helix 2 144..170 CDD:320188 13/25 (52%)
TM helix 3 182..212 CDD:320188 17/29 (59%)
TM helix 4 224..247 CDD:320188 8/23 (35%)
TM helix 5 266..294 CDD:320188 11/30 (37%)
7tm_GPCRs <519..594 CDD:475119 31/77 (40%)
TM helix 6 528..550 CDD:410628 9/21 (43%)
TM helix 7 562..587 CDD:410628 10/27 (37%)
htr2cXP_017951833.1 7tmA_5-HT2C 68..399 CDD:341346 128/500 (26%)
TM helix 1 69..95 CDD:341346 17/29 (59%)
TM helix 2 102..128 CDD:341346 13/25 (52%)
TM helix 3 141..171 CDD:341346 17/29 (59%)
TM helix 4 183..206 CDD:341346 8/22 (36%)
TM helix 5 224..253 CDD:341346 11/29 (38%)
TM helix 6 318..348 CDD:341346 13/29 (45%)
TM helix 7 361..386 CDD:341346 10/24 (42%)

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