DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oct-TyrR and LOC100493940

DIOPT Version :9

Sequence 1:NP_001163494.1 Gene:Oct-TyrR / 42452 FlyBaseID:FBgn0004514 Length:601 Species:Drosophila melanogaster
Sequence 2:XP_004912925.1 Gene:LOC100493940 / 100493940 -ID:- Length:394 Species:Xenopus tropicalis


Alignment Length:505 Identity:145/505 - (28%)
Similarity:223/505 - (44%) Gaps:147/505 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 QLAVPEWEAL-LTALVLSV--IIVLTIIGNILVILSVFTYKPLRIVQNFFIVSLAVADLTVALLV 162
            ||.|..:.|| .|.::::|  ||:.|::|||||:|::||.:.||..||.|:||||.||:.|..|:
 Frog    22 QLNVWPYTALECTLIIIAVVSIILSTVLGNILVVLAIFTSRALRAPQNLFLVSLASADILVGALI 86

  Fly   163 LPFNVAYSILGRWEFGIHLCKLWLTCDVLCCTSSILNLCAIALDRYWAITDPINYAQKRTVGRVL 227
            :||::|..::|.|.||...|.::|..|:|.|||||::||||::||||::|..:.|..|||..|:.
 Frog    87 IPFSLAREVMGYWHFGSVWCSMYLALDILFCTSSIVHLCAISIDRYWSVTKAVKYNLKRTPKRIK 151

  Fly   228 LLISGVWLLSLLISSPPLI--GWNDWPDEFTSATPCELTSQRGYVIYSSLGSFFIPLAIMTIVYI 290
            ..|:.:|::|.:||.|||:  ...:|        .|.|.....||::|...|||:|..||.::|.
 Frog   152 RSIAIIWVVSAIISFPPLLKSKHKEW--------ECLLNDDTWYVLFSCTVSFFVPCLIMILLYC 208

  Fly   291 EIFVATRRRLRE-RARANKLNTIALKSTELEPMANSSPVAASNSGSKSRLLASWLCCGRDRAQFA 354
            .|:...:.|:.. |...:..|:.|...|                            |.....   
 Frog   209 RIYRVAKHRVSSLRNGVSDCNSAAAGGT----------------------------CETHHT--- 242

  Fly   355 TPMIQNDQESISSETHQPQDSSKAGPHGNSDPQQQHVVVLVKKSRRAKTKDSIKHGKTRGGRKSQ 419
               |||:.|:...:..:...|....|                |....||||  |....:..|.|.
 Frog   243 ---IQNNHEAEELDLEESTSSVHKFP----------------KKHHHKTKD--KPSSAKAKRLSW 286

  Fly   420 SSSTCEPHGEQQLLPAGGDGGSCQPGGGHSGGGKSDAEISTESGSDPKGCIQVCVTQADEQTSLK 484
            ||:..:.|.:|                                        .:|::|        
 Frog   287 SSNRGQQHRDQ----------------------------------------SICISQ-------- 303

  Fly   485 LTPPQSSTGVAAVSVTPLQKKTSGVNQFIEEKQKISLSKERRAARTLGIIMGVFVICWLPFFLMY 549
                                            .:::..:|:|....|.:::|.|||||.|||..|
 Frog   304 --------------------------------MRLTQLREKRLTFVLAVVIGGFVICWFPFFFTY 336

  Fly   550 VILPFCQTCCP-TNKFKNFITWLGYINSGLNPVIYTIFNLDYRRAFKRLL 598
            .:...|:..|. ::...||..|:||.||.|||:|||:||.|:|:||:|:|
 Frog   337 SLESVCRKRCGISDALFNFFFWIGYCNSSLNPIIYTVFNRDFRKAFRRIL 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oct-TyrRNP_001163494.1 Zinc_peptidase_like <113..244 CDD:301362 60/132 (45%)
7tm_1 126..>293 CDD:278431 72/168 (43%)
LOC100493940XP_004912925.1 7tmA_alpha-2D_AR 34..382 CDD:320447 136/487 (28%)
TM helix 1 35..61 CDD:320447 11/25 (44%)
TM helix 2 68..94 CDD:320447 14/25 (56%)
TM helix 3 106..136 CDD:320447 17/29 (59%)
TM helix 4 148..171 CDD:320447 9/22 (41%)
TM helix 5 184..213 CDD:320447 11/28 (39%)
TM helix 6 309..339 CDD:320447 13/29 (45%)
TM helix 7 350..375 CDD:320447 13/24 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D323202at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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