Protein Alignment CG4000 and col-187

DIOPT Version :10

• Sequence 1: NP_650906.1
• Gene: CG4000 / 42451
• FlyBaseID: FBgn0038820
• Length: 263
• Species: Drosophila melanogaster
• Sequence 2: NP_510630.1
• Gene: col-187 / 181685
• WormBaseID: WBGene00000760
• Length: 307
• Species: Caenorhabditis elegans
• Alignment Length: 234
• Identity: 53/234 - (22%)
• Similarity: 69/234 - (29%)
• Gaps: 96/234 - (41%)

  Fly    44 VQPPPPPPEDDGSYKPPSPPEDGSWQPQPGLEGEYSDPELSQSGSGSITASDAGAAALSLVASQS 108
            ::|..||       .||.|         ||..||
 Worm   105 IRPKCPP-------GPPGP---------PGCRGE------------------------------- 122

  Fly   109 VDAQDAPAPAEAGGAGGAGQ-----------AGQAGALLGGAGGAGGAGGGGSAGGGGGGGGGGG 162
                  |.|:...|..|...           ..:...::...|..|..|..|..|..|..|..|.
 Worm   123 ------PGPSGLPGRRGINNYETLPLKKCIWRERLACIMCPRGPPGRRGRMGDDGEPGAPGRRGL 181

  Fly   163 GGTATS------GQSGDSGQPGAP-SPAGPQPDGEDGADG--------ADGPDGPDGSKGGKGGK 212
            .||..:      |..|:.|:||.| :|..|..||:||.:|        ..||.||.|::|..|.:
 Worm   182 SGTFLTGIKKLRGPPGEPGEPGRPGTPGTPGNDGKDGRNGYRLRPDKITRGPPGPMGARGEPGHR 246

  Fly   213 G-----------------GKGARNGAGGGGGAGGAAPQP 234
            |                 |...|.||.|..|..|...:|
 Worm   247 GLPGDNGMPGPMGPPGYRGDNGRRGAPGLPGRTGRHGKP 285

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4000	NP_650906.1	None
col-187	NP_510630.1	gly_rich_SclB	<168..>285	CDD:468478	35/116 (30%)