Sequence 1: | NP_650906.1 | Gene: | CG4000 / 42451 | FlyBaseID: | FBgn0038820 | Length: | 263 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001367319.1 | Gene: | col-144 / 179296 | WormBaseID: | WBGene00000717 | Length: | 294 | Species: | Caenorhabditis elegans |
Alignment Length: | 230 | Identity: | 80/230 - (34%) |
---|---|---|---|
Similarity: | 92/230 - (40%) | Gaps: | 34/230 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 27 GLPAVGTYLLSPPVVLLVQPPPPPPEDDGSYKPPSPPEDGSWQPQPGLEGEYSDPELSQSGSGSI 91
Fly 92 TASDAGAAALSLVASQSVDAQDAPA-PA-EAGGAGGAGQAGQAGALLGGAGGAGGAGGGGSAGGG 154
Fly 155 GGGGG----GGGGGTATSGQ--SGDSGQPGAPSPAGPQ-PDGEDGADGADGPDGPDGSKGGKGGK 212
Fly 213 GGKGARNGAGGGGGAGGAAPQPAPAAIPVQAAVLI 247 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4000 | NP_650906.1 | None | |||
col-144 | NP_001367319.1 | Col_cuticle_N | <21..56 | CDD:198156 | |
PRK07764 | <148..279 | CDD:236090 | 55/131 (42%) | ||
Collagen | 150..206 | CDD:396114 | 24/56 (43%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG28608 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |