DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nep4 and Ece1

DIOPT Version :9

Sequence 1:NP_650904.3 Gene:Nep4 / 42449 FlyBaseID:FBgn0038818 Length:1040 Species:Drosophila melanogaster
Sequence 2:XP_006239337.1 Gene:Ece1 / 94204 RGDID:620293 Length:769 Species:Rattus norvegicus


Alignment Length:899 Identity:303/899 - (33%)
Similarity:448/899 - (49%) Gaps:161/899 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 RTSFLPLGIPRECLGSGIELDIKPIDEEAYQRQKKRYQDIAPYWLE--------KIRIRERREAE 228
            ||.:.||......||.           .:|:|.....:|:.....|        ::..|..|..:
  Rat     2 RTVWPPLAAALAALGM-----------SSYKRATLDEEDLVDSLSEGDVYPNGLQVNFRSPRSGQ 55

  Fly   229 R-HAEEASAE----------ISEATAALQSFWNEEGTR-EGIRMTQA-----KTMKRYMDNKVDP 276
            | .|...|.|          .:...|.|.:...:..|| ..:.:|:|     .::...||..|||
  Rat    56 RCWAARTSVEKRLVVLVTLLAAGLVACLAALGIQYRTRTPPVCLTEACVSVTSSILNSMDPTVDP 120

  Fly   277 CVDFYKYACGNWERLHPIPKDKAGFDTFEMLRESLDLVLRNLLEKNTPVHSAAELRKSPVRNTLF 341
            |.||:.||||.|.:.:|:|...:.:.||..|.|....::::|||.:|.  ||:|           
  Rat   121 CQDFFSYACGGWIKANPVPDGHSRWGTFSNLWEHNQAIIKHLLENSTA--SASE----------- 172

  Fly   342 KLNEQGEGEGEADQAAELTAERLRRHIVSKRQLLNRVLVRYKRYTNGTKRKRLIETPRERTKEEE 406
                                                                             
  Rat   173 ----------------------------------------------------------------- 172

  Fly   407 AAPPVVLPKDKTKDKSDNEEQLHVPTDFLKPHQDAQLKAKNLYRSCVNSAVLAKRGLEPLHTLIR 471
                                              |:.||:..||:|:|...:.:...:||..||.
  Rat   173 ----------------------------------AEKKAQVYYRACMNETRIEELRAKPLMELIE 203

  Fly   472 ELGGWPVLESQWSESNFNWQVLAATLRRYNNDILIVQWVGADIKNSEENIVQFDQTGLGLPTREY 536
            :||||.: ...|::.||. ..|......|........:|.||.|||..|::|.||:|||||:|:|
  Rat   204 KLGGWNI-TGPWAKDNFQ-DTLQVVTAHYRTSPFFSVYVSADSKNSNSNVIQVDQSGLGLPSRDY 266

  Fly   537 FL-QPSNAKYLQAYQRYMAEVMHKMGASKADAQR-VASELVAFETQLAGITAPAEQRLNVTKLYK 599
            :| :..|.|.|..|..||.::...:|....|:.| ...:::.|||.||.||.|.|:|.:...:|.
  Rat   267 YLNKTENEKVLTGYLNYMVQLGKLLGGGDEDSIRPQMQQILDFETALANITIPQEKRRDEELIYH 331

  Fly   600 RMTLDQLQAVVPEIKWRAYLQSL-QDREVLGTEEVVIYAVEYMSKLVTLLDETDPRTVSNYMMWR 663
            ::|..:||.:.|.|.|..:|.:: ...|:..:|.:|:|..||:.::.||::.||...::|||||.
  Rat   332 KVTAAELQTLAPAINWLPFLNAIFYPVEINESEPIVVYDKEYLRQVSTLINSTDKCLLNNYMMWN 396

  Fly   664 FVRHRINNVDDRFDDIKQSFYHALFGREES--PQRWKVCIAQVNTNMGMAVGSMFVSRYFDNNSK 726
            .||...:.:|.||.|..:.|...::|.:::  | |||.|::....|:|.|:|.|||...|..:||
  Rat   397 LVRKTSSFLDQRFQDADEKFMEVMYGTKKTCLP-RWKFCVSDTENNLGFALGPMFVKATFAEDSK 460

  Fly   727 RDTLRMTHDLQQAFRDILKTTDWLDDTTKQLAEEKVNAMSLKIGYPDFILNPSELNSKYAGIEIY 791
            .....:..::::||.:.|.|..|:|:.|::.|:||.:|:...||||:||::|.||:..:......
  Rat   461 NIASEIILEIKKAFEESLSTLKWMDEDTRRSAKEKADAIYNMIGYPNFIMDPKELDKVFNDYTAV 525

  Fly   792 PEKYFENTLNVLLHTAKTEQAKLHERVNKTNWQTAPAIVNAYYSRNKNQIMFPAGILQPPFYHRH 856
            |:.||||.:.....:.:....:|.:..|:..|...|.:||||||..||:|:|||||||.|||.|.
  Rat   526 PDLYFENAMRFFNFSWRVTADQLRKAPNRDQWSMTPPMVNAYYSPTKNEIVFPAGILQAPFYTRS 590

  Fly   857 FPKSLNFGGIGVVIGHELTHGFDDKGRLFDRNGNIHKWWTDSSIRGFDERARCIIAQYSNYTVEE 921
            .|.:|||||||||:||||||.|||:||.:|::||:..||.:||:..|.::..|::.||:||:|. 
  Rat   591 SPNALNFGGIGVVVGHELTHAFDDQGREYDKDGNLRPWWKNSSVEAFKQQTECMVQQYNNYSVN- 654

  Fly   922 VGIVLNGESTQGENIADNGGLRQAFHAYQRWLKEHPSEVSDEILPGLNMTGPQLFFLNFGQVWCG 986
             |..:||..|.||||||||||:.|:.|||.|:|::.:|   :|||.|.:|..|||||.|.||||.
  Rat   655 -GEPVNGRHTLGENIADNGGLKAAYRAYQNWVKKNGAE---QILPTLGLTSNQLFFLGFAQVWCS 715

  Fly   987 AMRPEAIRNKLNTAIHSPGRFRVIGTLSNSVDFAREFNCPLGSPMNPQKKCSVW 1040
            ...||:....|.|..|||.||||||:||||.:|:..|.|||||||||:.||.||
  Rat   716 VRTPESSHEGLITDPHSPSRFRVIGSLSNSKEFSEHFRCPLGSPMNPRHKCEVW 769

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep4NP_650904.3 M13 274..1038 CDD:189000 276/768 (36%)
Ece1XP_006239337.1 PepO 105..769 CDD:226118 279/783 (36%)
M13 118..767 CDD:189000 276/768 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344485
Domainoid 1 1.000 47 1.000 Domainoid score I11668
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG61902
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100162
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.760

Return to query results.
Submit another query.