DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nep4 and Nepl13

DIOPT Version :9

Sequence 1:NP_650904.3 Gene:Nep4 / 42449 FlyBaseID:FBgn0038818 Length:1040 Species:Drosophila melanogaster
Sequence 2:NP_651096.1 Gene:Nepl13 / 42699 FlyBaseID:FBgn0039022 Length:741 Species:Drosophila melanogaster


Alignment Length:864 Identity:198/864 - (22%)
Similarity:337/864 - (39%) Gaps:204/864 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   237 EISEATAALQSFWNE-------EGTREG--IRMTQAKTMKRYMDNKVDPCVDFYKYACGNWERLH 292
            ::.:.|.|.|:..|.       ..:||.  :|...|..:::||:...|||.||::||||.|.|.|
  Fly    22 QLCDVTEARQNHMNRMQMSGNFPDSREEQLVRQKIATDVQKYMNLSADPCTDFFEYACGQWGRYH 86

  Fly   293 PIPKDKAGFDTFEMLRESLDLVLRNLLEKNTPVHSAAELRKSPVRNTLFKLNEQGEGEGEADQAA 357
            ..........|.:.|.|:                               |::||           
  Fly    87 KRQLRPDELSTAQQLMET-------------------------------KISEQ----------- 109

  Fly   358 ELTAERLRRHIVSKRQLLNRVLVRYKRYTNGTKRKRLIETPRERTKEEEAAPPVVLPKDKTKDKS 422
                         .:|||.:.|                             ||            
  Fly   110 -------------LQQLLTQPL-----------------------------PP------------ 120

  Fly   423 DNEEQLHVPTDFLKPHQDAQLKAKNLYRSCVNSAVLAKRGLEPLHTLIRELGGW-PVLESQWSES 486
                 .|.|..:.........|.:..|.|||.....|......|..::::.||. .|..|.| :.
  Fly   121 -----QHHPNGYSGASMTNVRKVRAFYESCVAVEANASERRRFLMKILKDNGGLRNVPNSNW-QH 179

  Fly   487 NFNW-QVLAATLRRYNNDILIVQWVGADIKNSEENIVQFDQTGLGLPTREYF-------LQPSNA 543
            |..| |.|....|.|..|||:...:..:::..:.|.:.|.:..|.:...|:.       .|..:.
  Fly   180 NRQWVQTLGELRRNYGLDILLGLEIDLNLQTMKGNTIYFGEPKLTIIPAEHCNALATRGAQVRDE 244

  Fly   544 KYLQAYQRYMAEVMHKMGASKADAQRVASELVAFETQLA------GITAPAEQ------------ 590
            .|....|:....:....|....:|.|.|.:::.||.:|.      .|..|.|:            
  Fly   245 VYELVQQQVTENLRDWFGMDTGEAARFAGDIIRFEFELCKQMGEQDIQKPEEEFPPAIQAQIYGA 309

  Fly   591 --RLNVTKLYKR---MTLDQLQAVV-PEIKWRAYLQSLQDREVLGTEEVVIYAVEYMSKLVTLLD 649
              |....:|.::   |||.:|.:.: ..:.::..::.:.:.:.  ..:|.:.:.||:..:|..:.
  Fly   310 RSRTGQERLRRQKGGMTLTELTSEMGNHLDFKMLVEVILESQY--PSQVYLRSPEYVKHVVRTVK 372

  Fly   650 ETDPRTVSNYMMWRFVRHRINNVDDRFDDIKQSFYHALFGREESP-QRWKVCIAQVNTNMGMAVG 713
            ..:..||..|:::           ...:::.|.       .||:| ||.:.|:..........:|
  Fly   373 ANNRITVGGYILY-----------VALNELNQP-------PEEAPSQRARQCVQVTQRLFPQVLG 419

  Fly   714 SMFVSRYFDNNSKRDTLRMTHDLQQAFRDILKT------TDWLDDTTKQLAEEKVNAMSLKIGYP 772
            .||......:|:|       |||...|.|::|.      .:|:|:..::.|..:::  ..::..|
  Fly   420 EMFQRHVQRDNAK-------HDLDAVFNDVIKALEEQFHVEWMDENDRRAARTRLS--QYRVSLP 475

  Fly   773 DF-ILNPSELNSKYAGIEIYPEKYFENTLNVLLHTAKTEQAKLHERVNKTNW-QTAPAI----VN 831
            |: .|:.::|..:.:      |.|:.. |.:.|.....:|   .|.:...:: |.|..:    |.
  Fly   476 DYQSLDLTDLQFQKS------EDYWRR-LEIALKYRSHQQ---FEALRGNDFGQDADGLDAFEVR 530

  Fly   832 AYYSRNKNQIMFPAGILQPPFYHRHFPKSLNFGGIGVVIGHELTHGFDDKGRLFDRNGNIHKWWT 896
            |..|..:..::...|:||.|:|:.::||||.:..:|..:...|...|||:|  ::.:......|.
  Fly   531 AALSPRQQMVLVGWGLLQAPYYNYYYPKSLKYALLGHRLASALVQAFDDEG--WNNHPQATAQWN 593

  Fly   897 DSSIRGFDERARCIIAQYSNYTVEEVGIVLNGESTQGENIADNGGLRQAFHAYQRWLKEHPSE-- 959
            :.::.|:...:.|..||||:|...|.|...|....: |.|||..||..||:||..||::...:  
  Fly   594 EVTMSGYRNASECQRAQYSSYLYNEPGEFRNATRLR-EIIADGSGLNLAFNAYLAWLEQQDHKLR 657

  Fly   960 --VSDEILPGLNMTGPQLFFLNFGQVWCGAM-RPEAIRNKLNTAIHSPGRFRVIGTLSNSVDFAR 1021
              ::.|.|..||.|..||||:.|.|..|.|. ..:||.:.:....|:|.|:.|.|.||||.:|.|
  Fly   658 PLLAKETLSELNFTNTQLFFIYFAQTRCWAKDNQDAILDSMPLMQHTPERWDVNGPLSNSAEFGR 722

  Fly  1022 EFNCPLGSPMNPQKKCSVW 1040
            ||.|.||:|||...||.|:
  Fly   723 EFGCALGTPMNSGDKCLVY 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep4NP_650904.3 M13 274..1038 CDD:189000 186/814 (23%)
Nepl13NP_651096.1 PepO 63..732 CDD:226118 184/812 (23%)
M13 68..738 CDD:189000 185/813 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454873
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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