DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep4 and Nepl6

DIOPT Version :9

Sequence 1:NP_650904.3 Gene:Nep4 / 42449 FlyBaseID:FBgn0038818 Length:1040 Species:Drosophila melanogaster
Sequence 2:NP_609023.3 Gene:Nepl6 / 33893 FlyBaseID:FBgn0259716 Length:655 Species:Drosophila melanogaster


Alignment Length:675 Identity:160/675 - (23%)
Similarity:254/675 - (37%) Gaps:178/675 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   438 HQDAQ----------LKAKNLYRSCVNSAVLAKRGLEPLHTLIRELGG----WPVLESQ---WSE 485
            ||.:|          .|..:.||:| ..|..:.|.:|  |.|.....|    ||....:   |.:
  Fly    87 HQRSQSPGFNESSVEAKVLHFYRTC-REAPPSTRKME--HYLRLAPPGQALTWPQFMPRGEPWPK 148

  Fly   486 SNFNWQVLAATLRRYNNDILIVQWVGADIKNSEENIVQFDQTGLGLPTREYFLQPSNAKYLQAYQ 550
            :.|.|......|.||....::|..:   :..|.||..:| :..:.:|:.|               
  Fly   149 AQFKWMKSLGHLYRYGFTNVLVNVL---VLRSSENSNRF-RLDISMPSLE--------------- 194

  Fly   551 RYMAEVMHKMGASKADAQRVASELVAFET-QLAGITAPAEQRLNVTKLYKRMTLDQLQAVVPEI- 613
                          .|||.:...|....| |:.|:  |.:..|.:.:..:|  |:....|:.|: 
  Fly   195 --------------GDAQHLGGFLSTLATLQIIGV--PTKSILPLVRKIRR--LESAIRVLTEVD 241

  Fly   614 -------------------KWRAYLQSLQDREVLGTEEVVIYA--VEYMSKLVTLLDETDPRTVS 657
                               .|:.:::|:....|  :...|:.|  .:|.:.|..|:|.||...|:
  Fly   242 DDDESETWTLRQWEYKTGYAWQGFVESIVGHSV--SHHYVMQAQNAKYFTGLKRLMDSTDAEVVA 304

  Fly   658 NYMMWRFVRHRINNVDDRFDDIKQSFYHALFGREESPQRWKVCIAQVNTNMGMAVGSMFVSRYFD 722
            ||:|.|||.:.|::..|..:.|.                   |:..:..||.:|...::..|:.|
  Fly   305 NYIMTRFVLYLIDDFIDSNEHID-------------------CVTDMRRNMNLASNLLYKERFLD 350

  Fly   723 NNS-KRDTLRMTHDLQQAFRDILKTTDWLDDTTKQLAEEKVNAMSLKIGYPDFILNPSELN---- 782
            ..: ::.|..:|...:|..|..|..   :::....|..|:.:.::.|..:  .:||...|.    
  Fly   351 PATLQQYTQEVTKVFEQLRRQFLLQ---INENRLGLTSEQNSMVATKAQH--VVLNIGNLPRGRD 410

  Fly   783 -----SKYAGIEIYP---EKYFENTLNVLLHTAKTEQAKLHERV-----------NKTNWQTAPA 828
                 |::....::|   ..|....||:|....:.:..:|::..           .||...:.| 
  Fly   411 HRSFVSRHYEDLVFPLPDFDYAREHLNLLEFRTRKQVLQLNQSAPTPDEFFYLSDPKTAMSSGP- 474

  Fly   829 IVNAYYSRNKNQIMFPAGILQPPFY----HRHFPKSLNFGGIGVVIGHELTHGFDDKGRLFDRNG 889
                ||....|.|:.|.|:||.||:    |..|..||    :|.|:.|||.|..|..|..:||.|
  Fly   475 ----YYLMRLNIIVVPHGLLQEPFFAADSHDIFKYSL----LGFVLAHELMHSVDTVGLYYDRYG 531

  Fly   890 NIHKWWTD-SSIRGFDERARCIIAQYSNYTVEEVGIVLNGESTQ--GENIADNGGLRQAFHAYQR 951
            |||:.... ||...|....:|                ||..|||  .|.|||..||..|:..|  
  Fly   532 NIHEIGPQISSSPRFVAGLQC----------------LNRNSTQYLDERIADIAGLDLAYSTY-- 578

  Fly   952 WLKEHPSEVSDEILPGLNMTGP-QLFFLNFGQVWCGAMRPEAIRNKLNTAIHSPGRFRVIGTLSN 1015
              .::.|::|   |.......| |:||||..|.:||...|      :|...|.....|:...|:.
  Fly   579 --FQNSSQMS---LTDFTTIPPQQIFFLNLAQFFCGDGDP------INFVGHDNDETRLQQMLNG 632

  Fly  1016 SVDFAREFNCPLGSPMNPQKKCSVW 1040
            ...|...|.||..|  |..:||.:|
  Fly   633 FAPFHEAFGCPAKS--NQPEKCQLW 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep4NP_650904.3 M13 274..1038 CDD:189000 158/671 (24%)
Nepl6NP_609023.3 M13 42..653 CDD:189000 158/671 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454859
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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