DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep4 and nep-24

DIOPT Version :9

Sequence 1:NP_650904.3 Gene:Nep4 / 42449 FlyBaseID:FBgn0038818 Length:1040 Species:Drosophila melanogaster
Sequence 2:NP_503005.3 Gene:nep-24 / 190993 WormBaseID:WBGene00013786 Length:567 Species:Caenorhabditis elegans


Alignment Length:727 Identity:135/727 - (18%)
Similarity:259/727 - (35%) Gaps:227/727 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 ASAEISEATAALQSFWNEEGTREGIRMTQAKTMKRYMDNKVDPCVDFYKYACGNWERLHPIPKDK 298
            |...|...|.|.::..|....     :|.|..:..|.|..||||.:|:::|||. |..|      
 Worm    23 APLAIGATTPATRNVCNTPAC-----ITLAHMLHNYHDPSVDPCDNFHQFACGR-EHEH------ 75

  Fly   299 AGFDTFEMLRESLDLVLRNLLEKNTPVHSAAELRKSPVRNTLFKLNEQGEGEGEADQAAELTAER 363
                      |:.|:..:                                               
 Worm    76 ----------ETEDIYTK----------------------------------------------- 83

  Fly   364 LRRHIVSKRQLLNRVLVRYKRYTNGTKRKRLIETPRERTKEEEAAPPVVLPKDKT-KDKSDNEEQ 427
                   |.:.:|.::.|:                              |.|::| :.||:|   
 Worm    84 -------KTKTINNIMKRF------------------------------LKKNETSRSKSEN--- 108

  Fly   428 LHVPTDFLKPHQDAQLKAKNLYRSC----VNSAVLAKRGLEPLHTLIRELGGWPVLESQWSESNF 488
                            ..:.||::|    .||.....:.|:.:...|:.:|.|||::.:|.||.|
 Worm   109 ----------------AMRTLYKACKTLEKNSTASRNKALQDIFQDIQSIGAWPVVDDKWDESKF 157

  Fly   489 NWQVLAATLRRYNNDILIVQWVGADIKNSEENIVQFDQTGLGL-------PTREYFLQPSNA-KY 545
            :.           ||.|:             |:|:..:...||       ..|.:.:.|..| ::
 Worm   158 DL-----------NDFLV-------------NLVRLGRKNFGLFQMARYVNVRNFAIGPEAAWRH 198

  Fly   546 LQAYQRYMAEVMHKMGASKADAQRVASELVAFETQLAGITAPAEQRLNVTKLYKRMTLDQLQA-- 608
            .....:.::|:: |..:.:.:.:::..:|..:              :|:.|...:...:.:|.  
 Worm   199 NVDLGKTISEIL-KANSVQTNNKKLLDDLAEY--------------VNLEKALSQHKFNTVQPGY 248

  Fly   609 -------VVPEIKW-RAYLQSLQ-DREVLGTEEVVIYAVEYM----------SKLVTLLDETDPR 654
                   .|..:.: |..|:.:. |:..|..|   :|.:.|:          :.|.|::..|..|
 Worm   249 IFSERSDFVSSVNFSRLVLEMMSPDKRTLFPE---VYQIMYLTNTSLFFGKNNNLETIIRNTSKR 310

  Fly   655 TVSNYMMWRFVRHRINNVDDRFDDIKQSFYHALFGREESPQRWKVCIAQVNTNMGMAVGSMFVSR 719
            .::||::::|       :|....|:       .:|   ||..:  |..:|...:..|....|...
 Worm   311 ALANYLIFKF-------IDTSIADL-------TYG---SPSAF--CEQKVINFLPRAALRAFYRN 356

  Fly   720 YFDNNSKRDTLRMTHDLQQAFRDILKTTDWLDDTTKQLAEEKVNAMSLKIGYPDFILNPSELNSK 784
            :....:::...::|...|.....|:..|||:...:|::|.::|::|::.|||||:...|.:|:..
 Worm   357 FISKENRKKITKLTEATQVQLLKIIGATDWMSIKSKKIAMDRVSSMNMVIGYPDYFDPPGKLDGL 421

  Fly   785 YAGIEI-YPEKYFENTLNVLLHTAKTEQAKLHERVNKTNWQTAPAIV-NAYYSRNKNQIMFPAGI 847
            :..:.: ..:.|:  |:...::....||...:.......:...|.:: ||.|:.|.|.:|..|..
 Worm   422 FEHLNLSSSDTYY--TVVRKINRFMREQEMDYYTGEVPYYPLFPGLMTNAMYNANDNNLMIFAPF 484

  Fly   848 LQPPFYHRHFPKSLNFGGIGVVIGHELTHGFDDKGRLFD-RNGNIHKWWTDSSIRGFDERARCII 911
            ...||:...||...|.......:.||:.|.|..  .|.| ..|....|.|......:::|.:|:.
 Worm   485 FDDPFFDSSFPDYANIAFTSNTLAHEMGHTFSP--HLMDIMTGTTEVWLTPKETEEYEKRVKCLE 547

  Fly   912 AQYSNYTVEEVG 923
            .||:.|...|.|
 Worm   548 DQYTEYDDPEYG 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep4NP_650904.3 M13 274..1038 CDD:189000 126/687 (18%)
nep-24NP_503005.3 GluZincin 58..561 CDD:301352 126/687 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161784
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.850

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