DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep4 and nep-20

DIOPT Version :9

Sequence 1:NP_650904.3 Gene:Nep4 / 42449 FlyBaseID:FBgn0038818 Length:1040 Species:Drosophila melanogaster
Sequence 2:NP_001317749.1 Gene:nep-20 / 188176 WormBaseID:WBGene00020293 Length:834 Species:Caenorhabditis elegans


Alignment Length:902 Identity:174/902 - (19%)
Similarity:303/902 - (33%) Gaps:301/902 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 LEKIRIRERREAER-HAEEASAEISEATAALQS--------------FW--NEEGTREGIR---- 259
            :||...|:.:|.|| .||:.||:  |.||.::.              ||  ...|.|:..:    
 Worm   153 MEKKNKRKEKEKERKKAEKFSAD--EKTANIKDRIINCVYPVILIILFWLLLFIGARQDEKPSLC 215

  Fly   260 -----MTQAKTMKRYMDNKVDPCVDFYKYACGNWERLHPIPKDKAGFDTFEMLRESLDLVLRNLL 319
                 :|.|..:..|.|..|..|.:|||..||.::.                             
 Worm   216 ESPQCITLAFELSAYQDTSVSKCHNFYKATCGKYKH----------------------------- 251

  Fly   320 EKNTPVHSAAELRKSPVRNTLFKLNEQGEGEGEADQAAELTAERLRRH---IVSKRQLLNRVLVR 381
                  |.|.:..:...:..:.|               .:..|.|||:   |.||.:        
 Worm   252 ------HQALDKHRDAKKKEVVK---------------RIVREFLRRNESSITSKFE-------- 287

  Fly   382 YKRYTNGTKRKRLIETPRERTKEEEAAPPVVLPKDKTKDKSDNEEQLHVPTDFLKPHQDAQLKAK 446
                                       |.:.|...|....|.|:..|.:..|             
 Worm   288 ---------------------------PAIRLMFGKCNKFSQNKTYLDIFKD------------- 312

  Fly   447 NLYRSCVNSAVLAKRGLEPLHTLIRELGGWPVLESQWSESNFNWQVLAATLRRYNNDILIVQWVG 511
                                   |.::|.||||:|.|.:..||.           ||.|:     
 Worm   313 -----------------------IEKIGPWPVLKSDWVDVMFNL-----------NDYLL----- 338

  Fly   512 ADIKNSEENIVQFDQTGLGLPTREY---------FLQPSNAKYLQAYQRYMAEVMHKMGASKADA 567
                    ::|:...|..||...|:         .:.||..|.....::.:.|::...|. :||.
 Worm   339 --------SLVELGFTDFGLFKLEFRQLAFGQFPVIAPSEQKQGNQLEKIILEILEANGV-QADR 394

  Fly   568 QRVAS---ELVAFETQLAGITAPAEQRLNVTKL----YKRMTLD-QLQAVVPEIKWRAYLQSLQD 624
            |:::.   |...|::||..::      |..|.:    |...||. .:.|:|.::...:....|..
 Worm   395 QKLSKYLREYSEFKSQLRHMS------LEGTSVKYIRYNASTLSVNISALVQKMAPMSTSSGLVR 453

  Fly   625 REVLGTEEVVIYAVEYMSK-LVTLLDETDPRTVSNYMMWRFVRHRINNVDDRFDDIKQSFYHA-- 686
            |...|.  ::..:..:..| |..::.:|..||::||:::.|       :|....|:.....|:  
 Worm   454 RIQSGI--LITNSSSFFGKNLDAIIQQTHKRTLANYLIFHF-------IDAVTFDLTSGAKHSEH 509

  Fly   687 ----LFGREESPQRWKVCIAQVNTNMGMAVGSMFV--SRYFDNNSKRDTLRMTHDLQQAFRDILK 745
                |..|                      ||:.|  ..:.|...:...:.|..||::...:::.
 Worm   510 TLIDLLPR----------------------GSLQVLSQDFVDEEDQGVMVEMAKDLKKHVVEMIS 552

  Fly   746 TTDWLD-------DTTKQLAEEKVNAMSLKIGYPDFILNPS--ELNSKYAGIEIYPEKYFENTLN 801
            ....||       :..::....||..:.:...||..|||.:  :||..|:           ::|:
 Worm   553 EGSSLDKGHLVFEEKERRKLIRKVQDILVVTKYPLEILNQNFEKLNLTYS-----------DSLH 606

  Fly   802 VL---LHTAKTEQAKLH-----ERVNKTNWQTAPAIVNAYYSRNKNQIMFPAGILQPPFYHRHFP 858
            .:   |...::||...:     :..:|..|.      :|:|.:..|.::..|.|:..|::...:|
 Worm   607 KIIQKLRRFRSEQLIEYLGGDLDPTDKGMWG------SAHYEQATNDLIIIAPIIDGPYFDTSYP 665

  Fly   859 KSLNFGGIGVVIGHELTHGFDDKGRLFDRNGNIHKWWTDSSIRGFDERARCIIAQYSNYTVEEVG 923
            ..:|...:|.:|..||....|......|..|:...|....|::.||...:|...:          
 Worm   666 NYVNIFFMGFIISRELGRSLDSVRIRKDEKGHTENWLKSESLKRFDNNVKCWRKK---------- 720

  Fly   924 IVLNGESTQGENIADNGGLRQAFHAYQRWLKEHPSEVSDEILPGLNMTGPQLFFLNFGQVWC--- 985
              :.|.....|.:||:.|...:|.|.::|.||....:.::|....:||..|:||......:|   
 Worm   721 --ITGTRFLNEMLADHVGHEASFMALKKWEKEMNGTIVEKIRGYESMTMEQIFFHLQALYFCRPP 783

  Fly   986 ----GAMRPEAIRNKLNTAIHSPGRFRVIGTLSNSVDFAREFNCPLGSPMNPQKKCS 1038
                |.:..:..|...:|        ||.....|...||:.|.|.....||.:.||:
 Worm   784 GGSTGELTAKDARQHYST--------RVNEAFKNMPQFAKAFGCSSNQNMNSKTKCT 832

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep4NP_650904.3 M13 274..1038 CDD:189000 152/816 (19%)
nep-20NP_001317749.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161782
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.850

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