DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep4 and nep-18

DIOPT Version :9

Sequence 1:NP_650904.3 Gene:Nep4 / 42449 FlyBaseID:FBgn0038818 Length:1040 Species:Drosophila melanogaster
Sequence 2:NP_494297.1 Gene:nep-18 / 186911 WormBaseID:WBGene00019343 Length:701 Species:Caenorhabditis elegans


Alignment Length:831 Identity:179/831 - (21%)
Similarity:303/831 - (36%) Gaps:224/831 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   266 MKRYMDNKVDPCVDFYKYACGNWERLHPIPKDKAGFDTFEMLRESLDLVLRNLLEKNTPVHSAAE 330
            :|.|.:..||||.||:::.||.:.. |.:..:..|:                             
 Worm    39 IKNYQNASVDPCEDFFEHTCGRYSE-HVMDDNSWGY----------------------------- 73

  Fly   331 LRKSPVRNTLFKLNEQGEGEGEADQAAELTAERLRRHIVSKRQLLNRVLVRYKRYTNGTKRKRLI 395
                                                  |..:|||.:|.. ..|.||        
 Worm    74 --------------------------------------VQYKQLLYQVFA-IARKTN-------- 91

  Fly   396 ETPRERTKEEEAAPPVVLPKDKTKDKSDNEEQLHVPTDFLKPHQDAQLKAKNLYRSCVNSAVLAK 460
                                   |..|...|||.:.|                 :||::...:.:
 Worm    92 -----------------------KFNSKPNEQLRIFT-----------------KSCLDRKEMDE 116

  Fly   461 RGLEPLHTLIRELGGWPVLESQWSESNFNWQVLAA---TLRRYNNDILIVQWVGADIKNSEENIV 522
            ...:.|...|.|.||:|:::..|:|..|:...:.|   ::.|.....|.|:...|...|...|  
 Worm   117 DTFQDLRNDIEERGGFPMIDPNWNEEKFDLSDMLAKYLSINRNRMGFLSVEPYAAIEGNKSVN-- 179

  Fly   523 QFDQTGLGLPTREYFLQPSN------AKYLQAYQRYMAEVMHKM------GASKADAQRVASELV 575
                        ..::.|..      |..:..|:..:|.::.::      ..::....:..:|||
 Worm   180 ------------RLYVSPGPHWVYNWAMGISIYKDSVAFMLRRLLKLENRELNETIYDKEFAELV 232

  Fly   576 AFETQLAGITAPAEQRLNVTKLYKRMTLDQLQAVVPEIKWRAYLQSL-------QDREVLGTEEV 633
            ..|...:.:.......|:...:.|...|..|..::|||.|...|::|       :|.|.| .|.|
 Worm   233 QLEANFSTLADYRNLALDNDNMSKSRNLTDLVKMIPEIDWIKILKALARHGTSEEDEEKL-LERV 296

  Fly   634 VIY-AVEYM----SKLVTLLDETDPRTVSNYMMWRFVRHRINNVDDRFDDIKQSFYHALFGREES 693
            .:: |.||.    .:|..:..||....::||::   ||..|        |:...||.     ::.
 Worm   297 TVHGAGEYFFGENRELARIATETPKSALANYLV---VRQLI--------DVALYFYD-----KDQ 345

  Fly   694 PQRWK---------VCIAQVNTNMGMAVGSMFVSRYFDNNSKRDTLRMTHD----LQQAFRDILK 745
            |::.|         .|..||.:...|...::|:.   .:..|.:.|::..:    ::..:..|..
 Worm   346 PRQNKFYNHVDQQSFCATQVASFFPMPSMNVFIE---SSQFKIENLKVIEEMFVKIKAEYEQIFT 407

  Fly   746 TTDWLDDTTKQLAEEKVNAMSLKIGYPDFILNPSELNSKYAGI---------EIYPE---KYFEN 798
            ..::|:...::....|:||:..|.|...:......|...|..:         ::|.:   .:.|.
 Worm   408 ENEYLELEIREFLIRKLNAIDGKFGLDQYTEGKPLLEKMYETLNFLDTDSPWQVYMKMWRHWSEQ 472

  Fly   799 TLNVLLHTAKTEQAKLHERVNKTNWQTAPAIVNAYYSRNKNQIMFPAGILQPPFYHRHFPKSLNF 863
            .:..::|....:...|........:|..|   |.:|      |..|  .|..|:....||.:.|:
 Worm   473 LVEHIVHDTPLDPVNLKMFGTHAAYQPYP---NHFY------INLP--YLTYPWMDADFPANTNY 526

  Fly   864 GGIGVVIGHELTHGFDDKGRLFDRNGNIHKWW---TDSSIRGFDERARCIIAQYSNYTVEEVGIV 925
            |.:|.|||||:.|.||...|..|.:|...::|   |:||...::.|.:|:..|||.|........
 Worm   527 GYLGYVIGHEIGHAFDHFHRKLDESGRQQQYWFTETNSSNTEYELREKCLRDQYSAYKEPGYDFF 591

  Fly   926 LNGESTQGENIADNGGLRQAFHAYQRWLKEHPSEVSDEI-LPGLNMTGPQLFFLNFGQVWCGAMR 989
            :||...:.|...|:.|:|.||..:::..||      |.. ||||.|:..||||.|:....|....
 Worm   592 MNGTHCRYEIAGDHMGIRTAFRVFEKVKKE------DRFRLPGLEMSEEQLFFYNYAFRQCDVYN 650

  Fly   990 PEAIRNKLNTAIHSPGRFRVIGTLSNSVDFAREFNCPLGSPMNPQKKCSVW 1040
            |..:...:....|...|:||.|.:.|..:||..||||..|||||:.||.::
 Worm   651 PNKLPRNMLARQHPTNRYRVNGVIQNIPEFAEAFNCPKNSPMNPEMKCKLY 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep4NP_650904.3 M13 274..1038 CDD:189000 176/819 (21%)
nep-18NP_494297.1 PepO 42..692 CDD:226118 172/817 (21%)
M13 47..699 CDD:189000 176/819 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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