DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep4 and F41C6.4

DIOPT Version :9

Sequence 1:NP_650904.3 Gene:Nep4 / 42449 FlyBaseID:FBgn0038818 Length:1040 Species:Drosophila melanogaster
Sequence 2:NP_001129930.1 Gene:F41C6.4 / 185599 WormBaseID:WBGene00018278 Length:393 Species:Caenorhabditis elegans


Alignment Length:418 Identity:75/418 - (17%)
Similarity:140/418 - (33%) Gaps:137/418 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   554 AEVMHKMGASKADAQRVASELVAFETQLAGITAPAEQRLNVTKLYKRMTLDQLQAVVPEIKWRAY 618
            |.:..::..|:.::   |.|.:..|..|..| .|.|....::..::|:.||..|...|.:  ..:
 Worm    58 APIFKELETSQEES---AWENLKIEEALNNI-KPGEIENEISAYFERVFLDMCQNNDPAM--TTF 116

  Fly   619 LQSLQDREVL------------------GTEEVVIYAVEYMSKLVTLLDETDPRTVSNYMM---- 661
            |  |:.:::|                  |.......|.::.|::.   .:||......|::    
 Worm   117 L--LRTQQMLSHEMSTKCRAENCLLRLGGDSNCTRAANDFKSRVA---KKTDSSHYQEYVLKLRE 176

  Fly   662 ----WRFVRHRINNVDDRFDDIKQSFYHALFGREESPQRWKVCIAQVNTNMGMAVGSMF----VS 718
                |:.....:|.:.|                    ..:||.:..:|:.:...|..:.    |.
 Worm   177 NIAGWKNKTRAVNILLD--------------------GNFKVGVDNINSFLMNMVDVLLQWIQVY 221

  Fly   719 RYFDNNSKRDTLRMTHDLQQAFRDILKTTDWLDDTTKQLAEEKVNAMSLKIGYPDFILNPSELNS 783
            :|...|              .|..||:.|.|::|       :|:|.....:....|:::      
 Worm   222 KYIAKN--------------PFELILQETPWVND-------QKINRALEAVARDLFVID------ 259

  Fly   784 KYAGIEIYPEKYFENTLNVLLHTAKTEQ----------------AKLHERVNKTNWQTAPAIVNA 832
            :| ||::      ...::.|:   ||||                ..::......|.:|...:...
 Worm   260 EY-GIQL------RENIDALM---KTEQDFLKCSADFSGKHDLFCSIYSYHFMFNGRTTTVLHFG 314

  Fly   833 YYSRNKNQIMFPAGILQPPFYHR--HFPKSLNFGGIGVVIGHELTHGF---DDKGRLFDRNGNIH 892
            |.:.|::..::    ...||..|  :...:.|.|..|.|:||||:|..   ..|..|...:.   
 Worm   315 YDATNRHPYIY----FGMPFIARAANSEMAANLGLAGYVVGHELSHSLIENPSKSYLLPYSS--- 372

  Fly   893 KWWTDSSIRGFDERARCIIAQYSNYTVE 920
                       .|...||..||:|...|
 Worm   373 -----------AEAINCIQTQYNNTCAE 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep4NP_650904.3 M13 274..1038 CDD:189000 75/418 (18%)
F41C6.4NP_001129930.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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