DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep4 and nep-4

DIOPT Version :9

Sequence 1:NP_650904.3 Gene:Nep4 / 42449 FlyBaseID:FBgn0038818 Length:1040 Species:Drosophila melanogaster
Sequence 2:NP_509156.2 Gene:nep-4 / 183746 WormBaseID:WBGene00016896 Length:437 Species:Caenorhabditis elegans


Alignment Length:337 Identity:84/337 - (24%)
Similarity:134/337 - (39%) Gaps:75/337 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   734 HDLQQAFRDILKTTD-WLDDT----TKQLAEEK---VNAMSLKIG---YPDFI---LNPSE---L 781
            :::.|...|:::..: ||:.|    ...|.||.   .||:.:.:.   |.:||   |:|.|   |
 Worm   137 NEIHQMMEDMVELGNIWLEKTPWVINNNLTEEMKNITNAIKMPVSLTKYTNFIYNLLSPIETDFL 201

  Fly   782 N--SKYAGIEIYPEKYFENTLNVLLHTAKTEQAKLHERVNKTNWQTAPAIVNAYYSRNKNQIMFP 844
            |  |::.||:       .|||..|.::     ||:..|...:.:...    |.|.:.......| 
 Worm   202 NCVSEFEGIQ-------NNTLFCLFYS-----AKIFVRTRGSYFIDD----NGYNAEGTIYFGF- 249

  Fly   845 AGILQPPFYHRHFP--KSLNFGGIGVVIGHELTHGFDDKGRLFDRNGNIHKWWTDSSIRGFDERA 907
                 |.:||..:.  ::...|..|..:|||:.|.|            |........:..|.:.|
 Worm   250 -----PNYYHTTYGNWRASKLGYTGTRVGHEIGHTF------------IEHSINPDGLPYFSKPA 297

  Fly   908 R-CIIAQY----SNYTVEEVGIVLN-GESTQGENIADNGGLRQAFHAYQRWLKEHPSEVSDEILP 966
            . |:..||    :.|...||....| .:.|..:|.||..||:.|:...:|.|.:...|.:|    
 Worm   298 EDCVQNQYLKTCNEYYEGEVPDACNTSDYTFDDNGADVFGLQLAYAILERDLSDQLREQAD---- 358

  Fly   967 GLNMTGPQLFFLNFGQVWCGAMRPEAIRNKLNTAIHSPGRFRV-IGTLSNSVDFAREFNCPLGSP 1030
            ||.:|..||.|.:|...:|..       :|.||...|.....| |..::....|.:.|||...|.
 Worm   359 GLKITNEQLLFYSFAYRFCRG-------SKSNTTDGSHSHHNVRINAVAQMPGFQQAFNCASDSR 416

  Fly  1031 M--NPQKKCSVW 1040
            |  :..|:|.::
 Worm   417 MMKSATKQCVIY 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep4NP_650904.3 M13 274..1038 CDD:189000 83/333 (25%)
nep-4NP_509156.2 GluZincin 250..425 CDD:387391 52/197 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161764
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.840

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