DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep4 and nep-21

DIOPT Version :9

Sequence 1:NP_650904.3 Gene:Nep4 / 42449 FlyBaseID:FBgn0038818 Length:1040 Species:Drosophila melanogaster
Sequence 2:NP_001360525.1 Gene:nep-21 / 179925 WormBaseID:WBGene00011794 Length:864 Species:Caenorhabditis elegans


Alignment Length:860 Identity:235/860 - (27%)
Similarity:392/860 - (45%) Gaps:161/860 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 KRYQD---IAPYWLEKIRIRERREAERHAEEASAEISEATAALQSFWNEEGTREGIRMTQAKTMK 267
            |.:.|   |.|...|...:...|.|:.|.:....                 :||.:|:  |..:.
 Worm   141 KTFTDGRPIYPLPFENSSVAVDRSAKNHNDVVCT-----------------SRECVRL--AGFLA 186

  Fly   268 RYMDNKVDPCVDFYKYACGNWERLHPIPKDKAGFDTFEMLRESLDLVLRNLLEKNTPVHSAAELR 332
            ..:::|::||.|||::||||:.                             |.||.|.:      
 Worm   187 ENLNSKINPCEDFYEFACGNYG-----------------------------LNKNLPAN------ 216

  Fly   333 KSPVRNTLFKLNEQGEGEGEADQAAELTAERLRRHIVSKRQLLNRVLVRYKRYTNGTKRKRLIET 397
             .|:|:|:..:.                 .||.:.:                       |.::::
 Worm   217 -KPLRHTISDVQ-----------------SRLNKQV-----------------------KSMLQS 240

  Fly   398 PRERTKEEEAAPPVVLPKDKTKDKSDNEEQLHVPTDFLKPHQDAQLKAKNLYRSCVNSAVLAKRG 462
            |....::         |.||.                          ||..|:.|::...|...|
 Worm   241 PISANEK---------PWDKV--------------------------AKGYYQKCLDEEELESTG 270

  Fly   463 LEPLHTLIRELGGWPVLE-SQWSESNFNWQVLAATLRRYN--NDILIVQWVGADIKNSEENIVQF 524
            :|.:..:.:.:||||.|| .:|.|.:.:|:...|.:....  |.:::...|..|..||..::::.
 Worm   271 VEAMRDIAKRIGGWPTLEGDKWQEWSHSWEEQIALVLNLTGVNAVILEMAVTHDPSNSSRSVIEL 335

  Fly   525 DQTGLGLPTREYFLQPSNAKYLQAYQRYMAEVMHKMGASKADAQRVASELVAFETQLAGITAPAE 589
            ||...|..:|..:|..:|...|:.|...|......:||..|.|::..:|.:.||.:|...:|...
 Worm   336 DQPKWGAGSRYPYLSGANDPMLRNYTTLMKMTAVALGADPAIAEKEMNEAMEFELKLVNFSADDM 400

  Fly   590 QRLNVTKLYKRMTLDQLQAVVPEIKWRAYLQSLQDREVLG---TEEVVIYAVEYMSKLVTLLDET 651
            .|.:..:...|..|.||::|.|.|.:..||::: .:|::.   ...|::..::|...:..:|..|
 Worm   401 VRRDPERGNNRFELWQLKSVFPFINFEKYLKTV-FKELVALSPNHTVIVREIDYFVGIQHVLQST 464

  Fly   652 DPRTVSNYMMWRFVRHRINNVDDRFD-------DIKQSFYH------ALFGREESPQRWKVCIAQ 703
            ..|.::||:.||.|:.  ....|.|.       ..::.||.      .:| ....|.||:.|:..
 Worm   465 PKRVLANYISWRLVQG--GPTGDYFSFSPFLPPSAREPFYQFKANQTGMF-NSPPPDRWEDCVTL 526

  Fly   704 VNTNMGMAVGSMFVSRYFD-NNSKRDTLRMTHDLQQAFRDILKTTDWLDDTTKQLAEEKVNAMSL 767
            ....|.|.||.:||..:|: ..:.:....:|..|:..|...|...||:|:.|::.|..|.|.:..
 Worm   527 SVIMMDMPVGRLFVENFFEKERAMKKMTELTSYLKNEFIKQLHVLDWMDEITRRRAISKANMIEY 591

  Fly   768 KIGYPDFILNPSELNSKYAGIEIYPEKYFEN-TLNVLLHTAKTEQAKLHERVNKTNWQTAPAIVN 831
            |.|:|..:.|.:.:...: |:.|.|.:|..: |:.|.|.....|..:|.:.::::.|..:||.|:
 Worm   592 KSGFPMVLFNDTWMEKNW-GMIIKPREYLLHLTIRVKLVRFTEELLRLDQPLDRSMWFQSPAQVD 655

  Fly   832 AYYSRNKNQIMFPAGILQPPFYHRHFPKSLNFGGIGVVIGHELTHGFDDKGRLFDRNGNIHKWWT 896
            |||:.|.|:::|||||:|.||.....|..:.:|.:|.|||||::|.|||:|..:|..||::.||.
 Worm   656 AYYAPNNNEMIFPAGIMQFPFLTLGVPNYITYGMVGAVIGHEVSHAFDDQGGQYDEMGNLNDWWD 720

  Fly   897 DSSIRGFDERARCIIAQYSNYTVEEVGIVLNGESTQGENIADNGGLRQAFHAYQRWLKEHPSEVS 961
            ..:...|.|:.||.:.||.|..|.|..|.|||:.:.|||||||||::.||:||:.| |.:.:.:|
 Worm   721 AETEEKFIEKTRCFVRQYENVHVVEADIHLNGQLSLGENIADNGGVKTAFNAYKAW-KSNTTGIS 784

  Fly   962 DEILPGL-NMTGPQLFFLNFGQVWCGAMRPEAIRNKLNTAIHSPGRFRVIGTLSNSVDFAREFNC 1025
            :..|||. |.|..|:|||.:...||..:||:.....:.|.:|:|.::|.:..|.|..:||:.|.|
 Worm   785 EPALPGFQNFTSQQMFFLAYANNWCSLVRPKHYIQIILTDVHAPSKYRAMIPLQNRPEFAKAFQC 849

  Fly  1026 PLGSPMNPQKKCSVW 1040
            |:||||||::||.||
 Worm   850 PIGSPMNPERKCQVW 864

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep4NP_650904.3 M13 274..1038 CDD:189000 219/785 (28%)
nep-21NP_001360525.1 M13 193..862 CDD:341056 219/785 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG61902
OrthoDB 1 1.010 - - D157132at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

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