DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep4 and nep-16

DIOPT Version :9

Sequence 1:NP_650904.3 Gene:Nep4 / 42449 FlyBaseID:FBgn0038818 Length:1040 Species:Drosophila melanogaster
Sequence 2:NP_001023203.2 Gene:nep-16 / 177541 WormBaseID:WBGene00018472 Length:868 Species:Caenorhabditis elegans


Alignment Length:1030 Identity:185/1030 - (17%)
Similarity:351/1030 - (34%) Gaps:324/1030 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 YEALLPEGSTYNDLINEEFILPASKRTQLQILAAERA--RRCQPYRYGNGESMELEERNTLMKDS 171
            :|:::.|...|:  :.....:|.|....:||..|..|  .....:|....|:.:.||.|....|.
 Worm    61 HESIVREVREYH--LQTTSRIPFSPPPTIQIHPAPIAGPESTSSFRTNPEENRDDEEDNVEETDQ 123

  Fly   172 RTSFLPLGIPRECLGSGIELDIKPIDEEAYQRQKKRYQDIAPYWLEKIRIRERREAERHAEEASA 236
            ...|                   |:.||.....:...|...|   |::...:::..:.:.:....
 Worm   124 EIEF-------------------PVTEERSIDPEITEQPEEP---ERVEDEQQKSGDDNLDNRLT 166

  Fly   237 EISEATA------ALQSFWNEEG-----------------------------TREGIRMTQAKT- 265
            :..||.:      .:..|:..:|                             |.:|.|...||: 
 Worm   167 QQLEAPSDRRIIFPITPFYRRKGTCSKCSIWLGALCALFFLLSIALFLVWVITTDGFRTIGAKST 231

  Fly   266 --------------MKRYMDNKVDPCVDFYKYACGNWERLHPIPKDKAGFDTFEMLRESLDLVLR 316
                          :...:|::::||.:||:|:|   :|.|....||                  
 Worm   232 NVCNTRQCIDIAFRLSSCIDDEIEPCENFYRYSC---QRYHSQTADK------------------ 275

  Fly   317 NLLEKNTPVHSAAELRKSPVRNTLFKLNEQGEGEGEADQAAELTAERLRRHIVSKRQLLNRVLVR 381
                                               :....::|..|.|||        ::.:|  
 Worm   276 -----------------------------------QMSFLSQLKDESLRR--------MHSLL-- 295

  Fly   382 YKRYTNGTKRKRLIETPRERTKEEEAAPPVVLPKDKTKDKSDNEEQLHVPTDFLKPHQDAQLKAK 446
                                :.||::.   :|||                        .|:| ::
 Worm   296 --------------------SSEEDSR---LLPK------------------------SARL-SR 312

  Fly   447 NLYRSCVNSAVLAKRGLEPLHTLIRELGGWPVLE--SQWSESNFNWQVLAATL----RRYNNDIL 505
            :||.:|:|:.:.:......|.|.||.....|:|.  ..:...:::|:..|..|    .|||   |
 Worm   313 SLYSACMNAVLRSSNAPTDLLTFIRNFPCGPLLRDCQNFHADSYSWERHAGMLDWYAGRYN---L 374

  Fly   506 IVQWVGADIKNSEENIVQFDQTGL----GLPTREY--FLQPSNAKYLQAYQRYMAEVMHKMGASK 564
            ||.......::..:.|:|.....|    ||..|:.  ..:||..::....|..:.:.:....|..
 Worm   375 IVYDRDVHPQDRSKIILQIKPPDLTPIVGLIERDLIDLARPSPTEFEPLLQLSLRQNLLSAFARD 439

  Fly   565 A---DAQRVASELVAFETQLAGITAPAEQRLNVTKLYKRMTLDQLQAVVPEIKWRAYLQSLQDRE 626
            :   |.:.|.|:|......:..:...|.|..::|.....||:.::...:|::    ||:...|.:
 Worm   440 SLLRDPRDVQSQLDEVARLMVDLYISARQSASLTPNTTYMTIGEMFQALPQL----YLREFLDAQ 500

  Fly   627 VLG------TEEVVIYAVEYMSKLVTLLDETDPRTVSNYMM----WRFVRHRINNVDDRFDDIKQ 681
            :..      |:.:.|...:|.::|..::.:|..:.|:||::    |               ::||
 Worm   501 LSNTYRWTETDMLSIQDYDYFARLSDIMAQTSRQAVANYLLTVTVW---------------NLKQ 550

  Fly   682 SFYHALFGREESPQ---RWKVCIAQVNTNMGMAVG-SMFVSRYFDNNSKRDTLRMTHDLQ--QAF 740
            ..|        ||:   .|:.|:.|:::   ..:| .|:|          |....|.||.  |.|
 Worm   551 YSY--------SPRDQYGWRECVDQISS---FEIGRKMYV----------DKASQTIDLPKIQEF 594

  Fly   741 RDILKTTDWLD---DTTKQLAEEKVNAMSLKIGYPDFILNPSELNSKYAGIEIYPEKYFENTLNV 802
            ...|| .|:|.   .|..|.. ..:|.:...:|:|..:.|...:....:.:.:....||::.:.|
 Worm   595 LQNLK-IDFLSVHRSTPLQYL-SNINRLGFYVGFPRRLQNEELIWKPVSQVSLNETDYFDSMIRV 657

  Fly   803 LLHTAKTEQ----AKLHERVNKTNWQTAP-AIVNAYYSRNKNQIMFPAGILQPPFY--HRHFPKS 860
                .|.|:    :::...::..:..|.| :.....|:.|...|:.|...::||.|  ....|..
 Worm   658 ----GKAERDYTMSQIGTYLDNDDTTTFPISDPTMLYNSNVGAIVIPLAFIEPPIYLPGDEVPMY 718

  Fly   861 LNFGGIGV----VIGHELTHGFDDKGRLFDRNGNIHKWWTDSSIRGFDERARCIIAQYSNYTVEE 921
            ..:..:|:    :|......|.|...:|         ...|:..|||.:..|   .:..|...|.
 Worm   719 GIYSSLGITTLQMISKVFWQGLDKTSQL---------ECLDNVFRGFLDANR---QRSPNIEPEL 771

  Fly   922 VGIVLNGESTQGENIADNGGLRQAFHAYQRWLKEHPSEVSDEILPGLNMT-GPQLFFLNFGQVWC 985
            :..:         .:||  ..:.|.::|.:|..:|... .::.||..:.| ..:...|.|..::|
 Worm   772 LATI---------ELAD--AFKSALYSYAKWQNDHHIH-HEKTLPAFDSTDSMRSLMLTFSTMFC 824

  Fly   986 GAMRPEAIRNKLNTAIHSPGR--FRVIGTLS-NSVDFAREFNCPLGSPMNPQKKC 1037
            .....|            ||.  ..:|.|:: ||..|:..|||...|.:..::.|
 Worm   825 SGEGSE------------PGSDYEAMINTVAENSRMFSIHFNCNNSSRLYNRRTC 867

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep4NP_650904.3 M13 274..1038 CDD:189000 153/813 (19%)
nep-16NP_001023203.2 GluZincin 254..>725 CDD:387391 116/633 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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