DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nep4 and nep-1

DIOPT Version :9

Sequence 1:NP_650904.3 Gene:Nep4 / 42449 FlyBaseID:FBgn0038818 Length:1040 Species:Drosophila melanogaster
Sequence 2:NP_496490.2 Gene:nep-1 / 174787 WormBaseID:WBGene00013926 Length:754 Species:Caenorhabditis elegans


Alignment Length:860 Identity:275/860 - (31%)
Similarity:416/860 - (48%) Gaps:166/860 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 APYWLEKIRIRERREAERHAEEASAEISEATAALQSFWNEEGTREGIRMTQAKTMKRYMDNKVDP 276
            |||:.:.|........::.......|..:.|   .:..:.||.:|..|:.|     :.::..:||
 Worm    30 APYFNDDINKTTTTSEDKTVGNTVVEEEKKT---YTVGDSEGYQEASRLLQ-----KSLNLSLDP 86

  Fly   277 CVDFYKYACGNWERLHPIPKDKAGFDTFEMLRESLDLVLRNLLEKNTPVHSAAELRKSPVRNTLF 341
            |.||::|||..|...||||.|...:..|...||.:...:|.|.|.||.:.:              
 Worm    87 CDDFFEYACRAWVDSHPIPDDLTSYSQFTATREKVLAEMRKLYEDNTSIPT-------------- 137

  Fly   342 KLNEQGEGEGEADQAAELTAERLRRHIVSKRQLLNRVLVRYKRYTNGTKRKRLIETPRERTKEEE 406
                                                           :|...||           
 Worm   138 -----------------------------------------------SKSIALI----------- 144

  Fly   407 AAPPVVLPKDKTKDKSDNEEQLHVPTDFLKPHQDAQLKAKNLYRSCVNSAVLAKRGLEPLHTLIR 471
                                                   |.:|.:|:::......|...|...|:
 Worm   145 ---------------------------------------KQIYNTCMDTEKHNAVGARDLLEKIK 170

  Fly   472 ELGGWPVLESQ-WSESNFN-WQVLAATLRRYNNDILIVQWVGADIKNSEENIVQFDQ--TGLGLP 532
            ..|.||::.:: |.||.|: .::|:.|::..:..:........|.:|....::.|||  .|||..
 Worm   171 TYGYWPMVHNEKWRESTFDLTKLLSNTIQSRDVSVFFDFGPAEDSRNVSRRLLSFDQGSLGLGYS 235

  Fly   533 TREYFL-QPSNAKYLQAYQRY-MAEVMH-----KMGASKADAQRVASELVAFETQLAGITAPAEQ 590
            ||:|:| :....|.::||::| :.:|.:     .|..:::..:....|::|||.:.|.|....|.
 Worm   236 TRDYYLDEKKYEKQMKAYRKYTIGKVRYYTEDAGMAVNESKIESDVDEIIAFEKEWAQILVAEED 300

  Fly   591 RLNVTKLYKRMTLDQLQAVVPEIKWR------------AYLQSLQDREVLGTEEVVIYAVEYMSK 643
            |.|.||||.....|.|:..:..|.|:            :||::        ...::|..|||:.|
 Worm   301 RRNYTKLYNVRRFDDLKEYMSIIDWKKLTLSTTPFLVHSYLKT--------NPSIIISDVEYLQK 357

  Fly   644 LVTLLDETDPRTVSNYMMWRFVRHRINNVDDRFDDIKQSFYHALFGREESPQRWKVCIAQVNTNM 708
            :.|||..||||.|:||::.|:.......:..:::|::|.|...::||::...|||.|::.....:
 Worm   358 MNTLLQNTDPRIVTNYILLRWAGSWSQEIGKKYEDLQQEFAFQMYGRKQRQPRWKDCVSSAGGKL 422

  Fly   709 GMAVGSMFVSRYFDNNSKRDTLRMTHDLQQAFRDILKTTDWLDDTTKQLAEEKVNAMSLKIGYPD 773
            ..|.|||:|.:|||.|:|..||.|..|||:|||:::...||:|..||:.|.||.:.|..:|||||
 Worm   423 SYASGSMYVRKYFDANAKNTTLDMITDLQEAFRNMMHANDWMDAETKKYALEKADQMLKQIGYPD 487

  Fly   774 FILNPSELNSKYAGIEIYPEKYFENTLNVLLHTAKTEQ-------AKLHERVNKTNWQTAPAIVN 831
            ||||..:|:..|.|:|..||..|...:.      |:.|       .:|.|.||:..:.::.|:||
 Worm   488 FILNDEKLDDWYKGLEGAPEDSFSQLVE------KSIQWRNNFYYRRLLEPVNRFEFISSAAVVN 546

  Fly   832 AYYSRNKNQIMFPAGILQPPFYHRHFPKSLNFGGIGVVIGHELTHGFDDKGRLFDRNGNIHKWWT 896
            |:||..:|.|.|||||||.||:...|||:||:||||.|||||:||||||.||.||..||:..||.
 Worm   547 AFYSPTRNAIAFPAGILQQPFFDARFPKALNYGGIGAVIGHEITHGFDDTGRQFDNVGNLRDWWD 611

  Fly   897 DSSIRGFDERARCIIAQYSNYTVEEVGIVLNGESTQGENIADNGGLRQAFHAYQRWLKEHPSEVS 961
            :::...|:||.:|||.||::..:....:.:||:.|||||||||||::|||.||:.:|::|..:  
 Worm   612 NTTSSKFNERTQCIIEQYADVKLRGTDLRINGKLTQGENIADNGGIKQAFKAYKSYLEKHGGQ-- 674

  Fly   962 DEILPGL-NMTGPQLFFLNFGQVWCGAMRPEAIRNKLNTAIHSPGRFRVIGTLSNSVDFAREFNC 1025
            :..||.. ::|..||||:.:.||||||..||.....|.|..|||...||...|:|..:||..|.|
 Worm   675 EARLPQFESLTNEQLFFVGYAQVWCGAKTPETKTLLLLTDPHSPETARVNTVLTNQPEFAEAFKC 739

  Fly  1026 PLGSPMNPQKKCSVW 1040
            |.||||||.|:|.||
 Worm   740 PAGSPMNPTKRCVVW 754

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep4NP_650904.3 M13 274..1038 CDD:189000 261/794 (33%)
nep-1NP_496490.2 PepO 80..754 CDD:226118 262/800 (33%)
M13 85..751 CDD:189000 261/792 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 274 1.000 Domainoid score I938
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG61902
OrthoDB 1 1.010 - - D157132at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100162
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2675
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.860

Return to query results.
Submit another query.