DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep4 and Mme

DIOPT Version :9

Sequence 1:NP_650904.3 Gene:Nep4 / 42449 FlyBaseID:FBgn0038818 Length:1040 Species:Drosophila melanogaster
Sequence 2:NP_001276391.1 Gene:Mme / 17380 MGIID:97004 Length:750 Species:Mus musculus


Alignment Length:827 Identity:275/827 - (33%)
Similarity:425/827 - (51%) Gaps:141/827 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 ISEATAALQSFWNEEGTREGIRMTQAKTMKRYMDNKVDPCVDFYKYACGNWERLHPIPKDKAGFD 302
            |:....||.:.:::...:....:..|..:.:.||..|:||.||:|||||.|.:.:.||:..:.:.
Mouse    41 IAVTMIALYATYDDGICKSSDCIKSAARLIQNMDASVEPCTDFFKYACGGWLKRNVIPETSSRYS 105

  Fly   303 TFEMLRESLDLVLRNLLEKNTPVHSAAELRKSPVRNTLFKLNEQGEGEGEADQAAELTAERLRRH 367
            .|::||:.|:::|::                                                  
Mouse   106 NFDILRDELEVILKD-------------------------------------------------- 120

  Fly   368 IVSKRQLLNRVLVRYKRYTNGTKRKRLIETPRERTKEEEAAPPVVLPKDKTKDKSDNEEQLHVPT 432
                                                        ||.:.||:|..          
Mouse   121 --------------------------------------------VLQEPKTEDIV---------- 131

  Fly   433 DFLKPHQDAQLKAKNLYRSCVNSAVLAKRGLEPLHTLIRELGGWPVLESQWSES-NFNW---QVL 493
                    |..|||.|||||:|.:.:..||.:||..|:.::.||||....|.:: ..:|   :.:
Mouse   132 --------AVQKAKTLYRSCINESAIDSRGGQPLLKLLPDIYGWPVASDNWDQTYGTSWTAEKSI 188

  Fly   494 AATLRRYNNDILIVQWVGADIKNSEENIVQFDQTGLGLPTREYFLQPSNAKYLQAYQRY------ 552
            |....:|...:||..:||.|.|||.::|:.|||..||||:|:|:  .....|.:|...|      
Mouse   189 AQLNSKYGKKVLINFFVGTDDKNSTQHIIHFDQPRLGLPSRDYY--ECTGIYKEACTAYVDFMIS 251

  Fly   553 MAEVMHKMGASKADAQRVASEL---VAFETQLAGITAPAEQRLNVTKLYKRMTLDQLQAVVP-EI 613
            :|.::.:..:...|..:::.|:   :..|.::|..|...|.|.:...||.:|||.:||.... |:
Mouse   252 VARLIRQEQSLPIDENQLSLEMNKVMELEKEIANATTKPEDRNDPMLLYNKMTLAKLQNNFSLEV 316

  Fly   614 KWRAYLQSLQDREVLGT--------EEVVIYAVEYMSKLVTLLDETDPRTVSNYMMWRFVRHRIN 670
            ..:::..|....|::.|        ||||:||.||::||..:|.:..||.:.|.|.|||:...::
Mouse   317 NGKSFSWSNFTNEIMSTVNINIQNEEEVVVYAPEYLTKLKPILTKYSPRDLQNLMSWRFIMDLVS 381

  Fly   671 NVDDRFDDIKQSFYHALFGREESPQRWKVCIAQVNTNMGMAVGSMFVSRYFDNNSKRDTLRMTHD 735
            ::...:.:.:.:|..||:|.......|:.|...||.||..|||.::|...|...||.....:...
Mouse   382 SLSRNYKESRNAFRKALYGTTSETATWRRCANYVNGNMENAVGRLYVEAAFAGESKHVVEDLIAQ 446

  Fly   736 LQQAFRDILKTTDWLDDTTKQLAEEKVNAMSLKIGYPDFIL-NPSELNSKYAGIEIYPEKYFENT 799
            :::.|...|....|:|..||:.||||..|:..:|||||.|: |.::||::|..:....::||||.
Mouse   447 IREVFIQTLDDLTWMDAETKKKAEEKALAIKERIGYPDDIISNENKLNNEYLELNYREDEYFENI 511

  Fly   800 LNVLLHTAKTEQAKLHERVNKTNWQTAPAIVNAYYSRNKNQIMFPAGILQPPFYHRHFPKSLNFG 864
            :..|..:...:..||.|:|:|..|.:..|:|||:||..:|||:||||||||||:......|||:|
Mouse   512 IQNLKFSQSKQLKKLREKVDKDEWISGAAVVNAFYSSGRNQIVFPAGILQPPFFSAQQSNSLNYG 576

  Fly   865 GIGVVIGHELTHGFDDKGRLFDRNGNIHKWWTDSSIRGFDERARCIIAQYSNYTVEEV-GIVLNG 928
            |||:|||||:||||||.||.|:::|::..|||..|...|.::::|::.||.|::.:.. |..|||
Mouse   577 GIGMVIGHEITHGFDDNGRNFNKDGDLVDWWTQQSANNFKDQSQCMVYQYGNFSWDLAGGQHLNG 641

  Fly   929 ESTQGENIADNGGLRQAFHAYQRWLKEHPSEVSDEILPGLNMTGPQLFFLNFGQVWCGAMRPEAI 993
            .:|.|||||||||:.||:.|||.::|::..|   ::||||::...|||||||.|||||..|||..
Mouse   642 INTLGENIADNGGIGQAYRAYQNYVKKNGEE---KLLPGLDLNHKQLFFLNFAQVWCGTYRPEYA 703

  Fly   994 RNKLNTAIHSPGRFRVIGTLSNSVDFAREFNCPLGSPMNPQKKCSVW 1040
            .|.:.|.:||||.||:||||.||.:||..|:|...|.|||::||.||
Mouse   704 VNSIKTDVHSPGNFRIIGTLQNSAEFADAFHCRKNSYMNPERKCRVW 750

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep4NP_650904.3 M13 274..1038 CDD:189000 266/787 (34%)
MmeNP_001276391.1 Stop-transfer sequence. /evidence=ECO:0000255 16..23
M13 77..748 CDD:341056 266/787 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841046
Domainoid 1 1.000 257 1.000 Domainoid score I2001
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG61902
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100162
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.720

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