DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep4 and nep-11

DIOPT Version :10

Sequence 1:NP_650904.3 Gene:Nep4 / 42449 FlyBaseID:FBgn0038818 Length:1040 Species:Drosophila melanogaster
Sequence 2:NP_494538.1 Gene:nep-11 / 173685 WormBaseID:WBGene00017557 Length:848 Species:Caenorhabditis elegans


Alignment Length:1063 Identity:312/1063 - (29%)
Similarity:482/1063 - (45%) Gaps:253/1063 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SRHSQLKLAMPSVHGAPATAPGSP-MNAKAR----SVKLGLGVNQRTGRVQWCPGLTCCKMLLLL 61
            |..||::|...|.:....|..||| .||.||    || :.:...:..|..:|....|..:. |||
 Worm    15 SNESQMQLITISENSDIPTPSGSPCFNAPARDEAPSV-IFIPGKKFQGTFRWWKSRTTMEK-LLL 77

  Fly    62 PVVMLPLTLVLILIMRLDGMLAALQLNEQRMRDLRNSHSEVPVYMEDYEALLPEGSTYNDLINEE 126
            ||::|...|..:|       ||.:...::|:..::..|           |...|.:.:.|     
 Worm    78 PVLLLFCLLTAVL-------LAVIINTDKRIEAMKTDH-----------ATQTEHAGFGD----- 119

  Fly   127 FILPASKRTQLQILAAERARRCQPYRYGNGESMELEERNTLMKDSRTSFLPLGIPRECLGSGIEL 191
               |....|:    .||..|                             :|..:|        |.
 Worm   120 ---PTENPTK----TAEDPR-----------------------------VPPIVP--------EA 140

  Fly   192 DIKPIDEEAYQRQKKRYQDIAPYWLEKIRIRERREAERHAEEASAEISEATAALQSFWNEEGTRE 256
            ...|..|.....:|.:..::.                    .....:..||..|.:         
 Worm   141 PTSPEPEVTTSTEKPKEPEVC--------------------STPGCVRAATHFLNA--------- 176

  Fly   257 GIRMTQAKTMKRYMDNKVDPCVDFYKYACGNWERLHPIPKDKAGFDTFEMLRESLDLVLRNLLEK 321
                         |:..||||.||:::|||.|...||||.|..||.||...||.:...||.||| 
 Worm   177 -------------MNTSVDPCDDFFEFACGQWNDQHPIPDDMYGFGTFAYAREQVRQQLRVLLE- 227

  Fly   322 NTPVHSAAELRKSPVRNTLFKLNEQGEGEGEADQAAELTAERLRRHIVSKRQLLNRVLVRYKRYT 386
                                                        :.:|::.:.:|          
 Worm   228 --------------------------------------------QEVVTESESIN---------- 238

  Fly   387 NGTKRKRLIETPRERTKEEEAAPPVVLPKDKTKDKSDNEEQLHVPTDFLKPHQDAQLKAKNLYRS 451
                                                                     .|:..|||
 Worm   239 ---------------------------------------------------------MARATYRS 246

  Fly   452 CVNSAVLAKRGLEPLHTLIRELGGWPVLESQWSESNFNWQVLAATLRR-YNNDILIVQWVGADIK 515
            |:|...|.:....||...:.|||.||:|:..|.::.||:..|....|| |..|:....::.||.|
 Worm   247 CMNKTQLDELMTGPLFETLTELGEWPLLQENWDKTKFNFTSLLVNSRRDYGVDVFFQLYIYADSK 311

  Fly   516 NSEENIVQFDQT--GLGLPTREYFLQPS-NAKYLQAYQRYMAEVMHKMGASKADAQRVASE---- 573
            |:..|.:..||:  .||..||:|:|..: .:.::.||::|:.::.|.:   |.|.....||    
 Worm   312 NTSRNTLFIDQSTLALGRGTRDYYLNTTLFSSHMTAYRKYLRQIAHLL---KTDGNLTRSESEMN 373

  Fly   574 -----LVAFETQLAGITAPAEQRLNVTKLYKRMTLDQLQAVVPEIKWRAYLQSLQDREVL----G 629
                 ::.||.:||.|....::|.|.|:||.:..:..|..::|::.|..:.||:...::.    .
 Worm   374 ADIEKIIDFEIELAKIIVAEDERRNNTRLYNKRQIQDLYNLLPQVDWVPFFQSIAPSDLTHLFHN 438

  Fly   630 TEEVVIYAVEYMSKLVTLLDETDPRTVSNYMMWRFVRHRINNVDDRFDDIKQSFYHALFGREESP 694
            ..|::|..:||:..:..|:::||...::||::||.|:..:..:|:||:||||.|...:.|:::||
 Worm   439 ETEIIICEIEYLQHVSELIEKTDVGLLTNYVLWRVVQSNVRYLDERFEDIKQDFLKVMTGQQQSP 503

  Fly   695 QRWKVCIAQVNTNMGMAVGSMFVSRYFDNNSKRDTLRMTHDLQQAFRDILKTTDWLDDTTKQLAE 759
            .|||.|....:|.:.:|.|:::|..:|..:.|.:.|||...|:.:|.|:::..||:|:.||.:|.
 Worm   504 PRWKDCAQVPSTVLPLAAGAIYVQAHFQESDKHEALRMIMHLRNSFADLVRQNDWMDEETKAVAI 568

  Fly   760 EKVNAMSLKIGYPDFILNPSELNSKYAGIEIY-PEKYFENTLNVLLHTAKTEQAKLHERVNKTNW 823
            ||.|:|...|||||...:..:|:.:|.|:.|. .:.|:......::.....|..||.:..:|..:
 Worm   569 EKANSMINNIGYPDVTNDLPKLDKQYLGLSISDSDTYYYIMKKSVVWMQSREFQKLTKPFDKHEF 633

  Fly   824 QTAPAIVNAYYSRNKNQIMFPAGILQPPFYHRHFPKSLNFGGIGVVIGHELTHGFDDKGRLFDRN 888
            ..:||:|||:||..||.|.||||||||||:...|||::|:|.||.|||||:||||||:|..:|::
 Worm   634 DISPAVVNAFYSPEKNAITFPAGILQPPFFSGTFPKAVNYGAIGAVIGHEITHGFDDQGSQYDKD 698

  Fly   889 GNIHKWWTDSSIRGFDERARCIIAQYSNYTVEEVGIVLNGESTQGENIADNGGLRQAFHAYQRWL 953
            ||:|.||::||:..||.|.|||:.||.||||.:....:||:.|||||||||||:::||.|||:::
 Worm   699 GNLHNWWSESSLNSFDTRRRCIVEQYGNYTVPKTNFRVNGKLTQGENIADNGGVKEAFQAYQKYV 763

  Fly   954 KEHPSEVSDEILPGLNM-TGPQLFFLNFGQVWCGAMRPEAIRNKLNTAIHSPGRFRVIGTLSNSV 1017
            .|:..|..   ||||.. |..|:||:::...|||..:..|...::.|..|||..|||||.|||..
 Worm   764 TENGEEPR---LPGLQQYTNEQIFFVSYAHFWCGKKKEAAAMQQVLTDEHSPEVFRVIGVLSNMQ 825

  Fly  1018 DFAREFNCPLGSPMNPQKKCSVW 1040
            .||..:.||..:|:||..||.||
 Worm   826 AFADVYKCPRNAPVNPDHKCIVW 848

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep4NP_650904.3 M13 274..1038 CDD:341056 261/782 (33%)
nep-11NP_494538.1 M13 181..845 CDD:341056 260/781 (33%)

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