DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep4 and nep-13

DIOPT Version :9

Sequence 1:NP_650904.3 Gene:Nep4 / 42449 FlyBaseID:FBgn0038818 Length:1040 Species:Drosophila melanogaster
Sequence 2:NP_001342017.1 Gene:nep-13 / 173672 WormBaseID:WBGene00018196 Length:732 Species:Caenorhabditis elegans


Alignment Length:867 Identity:168/867 - (19%)
Similarity:315/867 - (36%) Gaps:250/867 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   238 ISEATAALQSFWNEEGTREGI----------------RMTQAKTMKRYMDNKVDPCVDFYKYACG 286
            |:....|:..||..:...:.|                .:|.:.|:..:.:..:|||.|||:|:||
 Worm    52 IAICMGAVIVFWRMDSAPQAICKTDHNKTRDVCKTAECITLSSTLLNWQNTNIDPCEDFYEYSCG 116

  Fly   287 NWERLHPIPKDKAGFDTFEMLRESLDLVLRNLLEKNTPVHSAAELRKSPVRNTLFKLNEQGEGEG 351
            .::. |.:                                           |...:.||:     
 Worm   117 RYQE-HTL-------------------------------------------NDGIRANEK----- 132

  Fly   352 EADQAAELTAERLRRHIVSKRQLLNRVLVRYKRYTNGTKRKRLIETPRERTKEEEAAPPVVLPKD 416
                  :....:|.|..|.|.|                          ..|...|.|..::..|.
 Worm   133 ------DTIVMKLIRQFVLKNQ--------------------------STTSNSENALMLLYEKC 165

  Fly   417 KTKDKSDNEEQLHVPTDFLKPHQDAQLKAKNLYRSCVNSAVLAKRGLEPLHTLIRELGGWPVLES 481
            ..:.:.:|.            ||:.::..:.::.:                  ||::|.||:.:.
 Worm   166 SLRYRMENR------------HQETEVIQREVFEN------------------IRKIGSWPIADK 200

  Fly   482 QWSESNFNWQVLAATLRRYNNDILIVQWVGADIKNSEENIVQFDQTGLGL-PTREYFLQPSNAKY 545
            .|:.|:||                        :.|...|:........|| .||...|.|.|.  
 Worm   201 NWNSSHFN------------------------LNNMLSNMASIHMLPFGLFETRVIELYPMNT-- 239

  Fly   546 LQAYQRYMAEVMHKMGASKADAQRVASELVAFETQLAGITAPAEQ----------------RLNV 594
             .|.|..:.....|....:.:..|...:|::    :.|||:..::                .:::
 Worm   240 -TAKQLVIRPTKLKFSIPQEELVRAIRDLLS----VNGITSIMKKVKEDVAESFALDKEIGNIHI 299

  Fly   595 TKLYKRMTLDQLQAVVPEIKWRAYLQSLQDREV-----LGTEEVVIYAVEY------MSKLVTLL 648
            ....|..||.:||..||:|.:...::|..:.:.     |.|:   |::..:      .:.|.:::
 Worm   300 DPQPKPATLSELQKAVPDIDFERIIKSYLNPKTGNWSSLRTK---IFSARFELFFGKNNNLSSII 361

  Fly   649 DETDPRTVSNYMMWRFVRHRINNVDDRFDDIKQSFYHALFGREESPQRWKVCIAQVNTNMGMAVG 713
            ..|.||.::||:..:::.:.....   ||:.|      :|..::      .|...|.|::..|..
 Worm   362 ARTKPRILANYLFLKYIEYAYFFF---FDNTK------VFSDDD------FCTEVVTTSLPRASL 411

  Fly   714 SMFVSRYFDNNSKRDTLRMTHDLQQAFRDILKTTDWLDDTTKQLAEEKVNAMSLKIGYPDFILNP 778
            .:||..:|...:......:...::.|:.:|:..:.||.::|::.|.|||..|...|||.:.....
 Worm   412 RVFVRNHFKKENMAVASEIVEVVKTAYVEIINNSTWLHNSTRESAIEKVVKMKKVIGYTEEYERT 476

  Fly   779 SELNSKYAGIEI-YPEKYFENTLNVLLHTAKTEQAKLHERVNKTNWQT-----APAIV-NAYYSR 836
            ..|:..:..::: ..:.:|     ||:  .|..:.|:.:.::..:..:     .|.:: ||:|..
 Worm   477 GALDEMFETLQLSRSDSFF-----VLM--TKVNRFKIEQLMDFVSSDSLLNPIEPLVMANAFYFP 534

  Fly   837 NKNQIMFPAGILQPPFYHRHFPKSLNFGGIGVVIGHELTHGFDDKGRLFDRNGNIHKWWTDSSIR 901
            .||.:......|..|.:...:|:.:...|:|.|:.||:.|.||..||..|..|....|||.....
 Worm   535 TKNLLNVLVPFLDKPLFDFKYPRYVAMAGVGRVLAHEIGHAFDINGRQTDEIGRTRDWWTREDTE 599

  Fly   902 GFDERARCIIAQYSNYTVEEVGIVLNGESTQGENIADNGGLRQAFHAYQRWLKEHPSEVSDEILP 966
            .:|.|:.|...|::|:.........||.....|.|||..|:..::.|:::               
 Worm   600 EYDRRSECFAEQFTNFKDPSFKGKQNGTEVLAEIIADALGMEASWIAFKK--------------- 649

  Fly   967 GLNMTGPQ------------LFFLNFGQVWCGAMRPEAIRNKLNTAI-HSPGRFRVIGTLSNSVD 1018
             :|:|..|            |:|......:|.   |..|..:.:..: |...:||:.|..|||..
 Worm   650 -INLTEEQGLIQFEDHDFGKLYFQVAALDFCA---PSRIEERYSDQLSHPTNKFRINGAFSNSRA 710

  Fly  1019 FAREFNCPLGSPMNPQKKCSVW 1040
            ||..:.||:||.|||.::|.::
 Worm   711 FADTYKCPVGSKMNPVQRCDMF 732

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep4NP_650904.3 M13 274..1038 CDD:189000 160/811 (20%)
nep-13NP_001342017.1 M13 104..729 CDD:189000 160/810 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161778
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.850

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