DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nep4 and ecel1

DIOPT Version :9

Sequence 1:NP_650904.3 Gene:Nep4 / 42449 FlyBaseID:FBgn0038818 Length:1040 Species:Drosophila melanogaster
Sequence 2:XP_012818808.2 Gene:ecel1 / 100496473 XenbaseID:XB-GENE-989944 Length:764 Species:Xenopus tropicalis


Alignment Length:882 Identity:268/882 - (30%)
Similarity:411/882 - (46%) Gaps:172/882 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 LGSGIELDIKPIDEEAYQRQKKRYQDIAPYWLEKIRIRERREA---------------------- 227
            |.:|..|.:.         .||:.:.:.|.|       .|||.                      
 Frog    29 LSNGFNLQVS---------SKKQTKKVVPRW-------SRRETCLLSGLVFAVGLCVILGCMLVL 77

  Fly   228 ERHAEEASAEISEATAALQSFWNEEGTREGIRMTQAKTMKRYMDNKVDPCVDFYKYACGNWERLH 292
            :..:.|...:..|.....::|           |..:|.:...:|..:.||.|||.:|||.|.|.|
 Frog    78 KYLSMEQDVQCLEGCQERKAF-----------MRASKFITNNIDPTISPCTDFYSFACGGWLRRH 131

  Fly   293 PIPKDKAGFDTFEMLRESLDLVLRNLLEKNTPVHSAAELRKSPVRNTLFKLNEQGEGEGEADQAA 357
            .||:||..:.|...:.|..:..|.:||             ..|||                    
 Frog   132 GIPEDKLIYGTIAAIGEQNEEKLEHLL-------------LQPVR-------------------- 163

  Fly   358 ELTAERLRRHIVSKRQLLNRVLVRYKRYTNGTKRKRLIETPRERTKEEEAAPPVVLPKDKTKDKS 422
                   |:|..|                                                    
 Frog   164 -------RKHKGS---------------------------------------------------- 169

  Fly   423 DNEEQLHVPTDFLKPHQDAQLKAKNLYRSCVNSAVLAKRGLEPLHTLIRELGGWPVLESQWSESN 487
                              |:.|.|..::||:|...:.:.|..|:..:|.:.|||.:.|...::.:
 Frog   170 ------------------AERKVKEFFKSCLNMRDIDRLGARPMLQVIEDCGGWDLPEDPRTQWD 216

  Fly   488 FNWQVLAATLRRYNNDILIVQWVGADIKNSEENIVQFDQTGLGLPTREYFL--QPSNAKYLQAYQ 550
            || ::|..|...|:..:.....|..|.|||...|::.||.||.||.|..:|  ...:.|.|:||:
 Frog   217 FN-ELLYKTQGVYSTAVFFSMTVSLDDKNSSRYIIRIDQDGLTLPERTLYLGQDEESIKVLEAYK 280

  Fly   551 RYMAEVMHKMGASKADAQRVASELVAFETQLAGITAPA--EQRLNVTKLYKRMTLDQLQAVVPEI 613
            .:|..::..:|..  :.|:.|.|::..|..|:.||...  :.|.:::.:|.::||.|||.:.|.:
 Frog   281 VFMQTILSLLGVE--NVQKKAEEILHLEQHLSNITISEFDDMRRDISTMYNKVTLAQLQQITPHL 343

  Fly   614 KWRAYLQSLQDREVLGTEEVVIYAVEYMSKLVTLLDETDPRTVSNYMMWRFVRHRINNVDDRFDD 678
            .|:..|..:........||||:.|.:||.|:..::..|....:.|||:||.|.....::...|.|
 Frog   344 NWKNLLNRIFHTNFPEDEEVVVLATDYMQKVSEMIRSTPASVLHNYMLWRIVVVLSEHLSTPFRD 408

  Fly   679 IKQSFYHALFGREESPQRWKVCIAQVNTNMGMAVGSMFVSRYFDNNSKRDTLRMTHDLQQAFRDI 743
            ........:.|.|:..:..|||:.|.|.:.|||:|::||..||.::||....::..:::......
 Frog   409 AIHELSKEMEGSEKQAELTKVCLTQANKHFGMALGALFVEEYFSSSSKAKVQQLVENIKHILDYR 473

  Fly   744 LKTTDWLDDTTKQLAEEKVNAMSLKIGYPDFILNPSELNSKYAGIEIYPEKYFENTLNVLLHTAK 808
            |:..||:|..|||.|.||:..|.:.|||||.:|.|..::.:|. .|:..:.||:|.||.:.::.|
 Frog   474 LEELDWMDTETKQAAREKLKHMMVMIGYPDVLLQPESMDKEYE-FEVNEKTYFKNILNSIRYSIK 537

  Fly   809 TEQAKLHERVNKTNWQTAPAIVNAYYSRNKNQIMFPAGILQPPFYHRHFPKSLNFGGIGVVIGHE 873
            ....::.:.|:|:.|...|..:||||..||||::||||||||..|...||:|||:||||.:||||
 Frog   538 MAVRRIRQEVDKSAWLLPPQALNAYYLPNKNQMVFPAGILQPTLYDPDFPQSLNYGGIGTIIGHE 602

  Fly   874 LTHGFDDKGRLFDRNGNIHKWWTDSSIRGFDERARCIIAQYSNYTVEEVGIVLNGESTQGENIAD 938
            ||||:||.|..:|.|||..:|||:.|...|.::|.||:..|.|:||....:  ||.:|.||||||
 Frog   603 LTHGYDDWGGQYDANGNPIQWWTEDSYSKFLKKAECIVDLYENFTVYNQRV--NGRTTLGENIAD 665

  Fly   939 NGGLRQAFHAYQRWLKEHPSEVSDEILPGLNMTGPQLFFLNFGQVWCGAMRPEAIRNKLNTAIHS 1003
            .|||:.|::|||:|::::..|   ..||.|..|..||||:.|.|.||...|.::|..::.|..|:
 Frog   666 LGGLKLAYYAYQKWVRDNGPE---RPLPRLKYTHDQLFFIAFAQNWCIKRRSQSIYLQVLTDKHA 727

  Fly  1004 PGRFRVIGTLSNSVDFAREFNCPLGSPMNPQKKCSVW 1040
            |..:||:|::|...:|.|.|:||..|||||..|||||
 Frog   728 PEHYRVMGSVSQFEEFGRVFHCPRNSPMNPVHKCSVW 764

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep4NP_650904.3 M13 274..1038 CDD:189000 248/767 (32%)
ecel1XP_012818808.2 M13 113..762 CDD:341056 248/767 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG61902
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.030

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