Sequence 1: | NP_001262772.1 | Gene: | Lrrk / 42447 | FlyBaseID: | FBgn0038816 | Length: | 2513 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_195442.2 | Gene: | AT4G37250 / 829879 | AraportID: | AT4G37250 | Length: | 768 | Species: | Arabidopsis thaliana |
Alignment Length: | 645 | Identity: | 135/645 - (20%) |
---|---|---|---|
Similarity: | 230/645 - (35%) | Gaps: | 183/645 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 543 ALTAITRIDFSHNVLTS-IPQELFHLVSLRYLNVAQNKIT-DLPAPIGQTYGCPVLDELFLQDNQ 605
Fly 606 LT-TLPAAIFHLPALSILDVSNNKLQ-QLPFDLWRAPKLRELNVAFNLLRDLPVPPMQTSSSLLS 668
Fly 669 LD-KLNLQSFEEPPS---NKPRNVTQQRLTHRNLWSATLDITDNDMKWQHEQDLGDGKTAGVGSS 729
Fly 730 QLSSLNIANNLFTSIPAALPCLAVNLTRLNMSYNSLRSMGHVTSYPATLKQLDL--SHNEISCWP 792
Fly 793 SL--------PRITESDPH----------------------------LLCYSCVQ---LPEGRDD 818
Fly 819 DYKTASSKGSSSSATSFRASVLKSVCRHRRHLRLEALRTLILADNLLTRIQLSTDDATTLFNESE 883
Fly 884 DADWSVVGVNRSKVIFPNLSMLDMTNNCLKEIPASLHELSSLSVLNISGNVNITELPPHLGLLSR 948
Fly 949 LWNLNTRGCLLQEPLRSMIESKKHKTMDIVGYLKSIYEDAQPYARM--KLM---VVGVAGI---- 1004
Fly 1005 -GKSTLLDLLRQGA--------GSGSSSSSHRSRASENHWAKRMGHARSTSR--------SHRHS 1052
Fly 1053 SASSANISTVGVD----IGTWICEKRKRAPGSHGPVVFRTWDFGGQKEYYATHQYFLSKR 1108 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrrk | NP_001262772.1 | Ank_2 | 111..200 | CDD:289560 | |
ANK | 146..286 | CDD:238125 | |||
ANK repeat | 146..177 | CDD:293786 | |||
Ank_4 | 179..232 | CDD:290365 | |||
ANK repeat | 179..209 | CDD:293786 | |||
Ank_2 | 216..389 | CDD:289560 | |||
ANK | 361..477 | CDD:238125 | |||
ANK repeat | 361..390 | CDD:293786 | |||
Ank_2 | 364..464 | CDD:289560 | |||
ANK repeat | 406..435 | CDD:293786 | |||
ANK repeat | 437..464 | CDD:293786 | |||
LRR_8 | <544..580 | CDD:290566 | 10/36 (28%) | ||
leucine-rich repeat | 547..569 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 569..629 | CDD:290566 | 19/61 (31%) | ||
leucine-rich repeat | 570..595 | CDD:275380 | 8/25 (32%) | ||
leucine-rich repeat | 596..618 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 619..641 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 642..676 | CDD:275380 | 9/34 (26%) | ||
leucine-rich repeat | 677..730 | CDD:275380 | 18/55 (33%) | ||
LRR_8 | 729..788 | CDD:290566 | 8/60 (13%) | ||
leucine-rich repeat | 731..754 | CDD:275380 | 4/22 (18%) | ||
LRR_8 | 855..933 | CDD:290566 | 14/77 (18%) | ||
leucine-rich repeat | 855..901 | CDD:275380 | 8/45 (18%) | ||
leucine-rich repeat | 902..924 | CDD:275380 | 3/21 (14%) | ||
leucine-rich repeat | 925..949 | CDD:275380 | 3/23 (13%) | ||
P-loop_NTPase | 993..1211 | CDD:304359 | 34/146 (23%) | ||
COR | 1230..1471 | CDD:292713 | |||
STYKc | 1796..2092 | CDD:214568 | |||
STKc_LRRK | 1801..2095 | CDD:270902 | |||
AT4G37250 | NP_195442.2 | PLN00113 | 5..>250 | CDD:215061 | 52/172 (30%) |
leucine-rich repeat | 70..84 | CDD:275380 | |||
leucine-rich repeat | 92..115 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 116..139 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 140..163 | CDD:275380 | 8/25 (32%) | ||
leucine-rich repeat | 164..207 | CDD:275380 | 11/46 (24%) | ||
leucine-rich repeat | 208..232 | CDD:275380 | 8/23 (35%) | ||
PKc_like | 455..752 | CDD:419665 | 42/211 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 138 | 1.000 | Inparanoid score | I1805 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.050 |