Sequence 1: | NP_001262772.1 | Gene: | Lrrk / 42447 | FlyBaseID: | FBgn0038816 | Length: | 2513 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_179132.1 | Gene: | AT2G15300 / 816019 | AraportID: | AT2G15300 | Length: | 744 | Species: | Arabidopsis thaliana |
Alignment Length: | 724 | Identity: | 137/724 - (18%) |
---|---|---|---|
Similarity: | 238/724 - (32%) | Gaps: | 272/724 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 474 LPTPVE-VNVFLPSTSNISYSAMFPNNPTII------------DWHSMGSSVQLSVVRVPWM--V 523
Fly 524 SGVLLLNPKLQSHPRLNEVALTAITRIDFSHNVLTSIPQELFHLVSLRYLNVAQNKITDLPAPIG 588
Fly 589 QTYGCPVLDELFLQDNQLTTLPAAIFHLPALSILDVSNNKLQ-QLPFDLWRAPKLRELNVAFNLL 652
Fly 653 RDLPVPPMQTSSSLLSLDKLNLQSFEEPPSNKPRNVTQQRLTHRNLWSA----------TLDITD 707
Fly 708 NDMKWQHEQDLGDGK-TAGVGSSQLSSLNIANNLFT---SIPAA--LPCLAVNLTRLNMSYNSLR 766
Fly 767 SMGHVTSYPATLKQL--DLSHNEISCWPSL-------------PRITE-SDPHLLCYSCVQLP-- 813
Fly 814 EGRDDDYKTASSKGSSSSATSFRASVLKSVCRHRRHLRLEALRTLILADNLLTRIQLSTDDATTL 878
Fly 879 FNESEDADWSVVGVNRSKVIFPNLSMLDMTNNCLKE-----IPASLHELSSLSVLNISGNVNITE 938
Fly 939 LPP-HLGL---LSRLWNLNT-----RGCLLQEPLRSMIES----KKHKT------------MDIV 978
Fly 979 GYLKS-------------IYE----------------DAQPYARMKLMVVGVAGIGKSTLLDLLR 1014
Fly 1015 -------------------------QGAGSGSSSSSHRSRASENHWAKRMGHARSTS----RSHR 1050
Fly 1051 HSSASSANI 1059 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrrk | NP_001262772.1 | Ank_2 | 111..200 | CDD:289560 | |
ANK | 146..286 | CDD:238125 | |||
ANK repeat | 146..177 | CDD:293786 | |||
Ank_4 | 179..232 | CDD:290365 | |||
ANK repeat | 179..209 | CDD:293786 | |||
Ank_2 | 216..389 | CDD:289560 | |||
ANK | 361..477 | CDD:238125 | 2/2 (100%) | ||
ANK repeat | 361..390 | CDD:293786 | |||
Ank_2 | 364..464 | CDD:289560 | |||
ANK repeat | 406..435 | CDD:293786 | |||
ANK repeat | 437..464 | CDD:293786 | |||
LRR_8 | <544..580 | CDD:290566 | 8/35 (23%) | ||
leucine-rich repeat | 547..569 | CDD:275380 | 4/21 (19%) | ||
LRR_8 | 569..629 | CDD:290566 | 12/59 (20%) | ||
leucine-rich repeat | 570..595 | CDD:275380 | 4/24 (17%) | ||
leucine-rich repeat | 596..618 | CDD:275380 | 3/21 (14%) | ||
leucine-rich repeat | 619..641 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 642..676 | CDD:275380 | 10/33 (30%) | ||
leucine-rich repeat | 677..730 | CDD:275380 | 13/63 (21%) | ||
LRR_8 | 729..788 | CDD:290566 | 19/65 (29%) | ||
leucine-rich repeat | 731..754 | CDD:275380 | 10/27 (37%) | ||
LRR_8 | 855..933 | CDD:290566 | 11/82 (13%) | ||
leucine-rich repeat | 855..901 | CDD:275380 | 5/45 (11%) | ||
leucine-rich repeat | 902..924 | CDD:275380 | 5/26 (19%) | ||
leucine-rich repeat | 925..949 | CDD:275380 | 6/27 (22%) | ||
P-loop_NTPase | 993..1211 | CDD:304359 | 20/96 (21%) | ||
COR | 1230..1471 | CDD:292713 | |||
STYKc | 1796..2092 | CDD:214568 | |||
STKc_LRRK | 1801..2095 | CDD:270902 | |||
AT2G15300 | NP_179132.1 | LRRNT_2 | 24..65 | CDD:285463 | 6/43 (14%) |
LRR_RI | <94..254 | CDD:238064 | 53/222 (24%) | ||
LRR_8 | 101..160 | CDD:290566 | 19/83 (23%) | ||
leucine-rich repeat | 102..125 | CDD:275380 | 7/47 (15%) | ||
leucine-rich repeat | 126..149 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 150..173 | CDD:275380 | 11/44 (25%) | ||
LRR_8 | 172..228 | CDD:290566 | 17/65 (26%) | ||
leucine-rich repeat | 174..194 | CDD:275380 | 4/20 (20%) | ||
leucine-rich repeat | 195..217 | CDD:275380 | 7/30 (23%) | ||
leucine-rich repeat | 218..242 | CDD:275380 | 8/23 (35%) | ||
STKc_IRAK | 484..742 | CDD:270968 | 23/123 (19%) | ||
Pkinase | 484..737 | CDD:278497 | 23/123 (19%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 138 | 1.000 | Inparanoid score | I1805 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.050 |