Sequence 1: | NP_001262772.1 | Gene: | Lrrk / 42447 | FlyBaseID: | FBgn0038816 | Length: | 2513 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001100573.1 | Gene: | Ripk4 / 304053 | RGDID: | 1311691 | Length: | 786 | Species: | Rattus norvegicus |
Alignment Length: | 472 | Identity: | 114/472 - (24%) |
---|---|---|---|
Similarity: | 171/472 - (36%) | Gaps: | 138/472 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSDSDEARAQ-GDIGAMEVGAQKL----FSNSHPPQKQLVQPLD------------HPTPTKRQ- 47
Fly 48 ----------IKTNATHSPNATFLNKCNSCRASWAPTCAVRHKTAWINDHKNVAIDFPQFNAREE 102
Fly 103 VRQIKHGELRTAVISGDERTVRVLLAALGTERQIIVNMAPSGANTLLFLACQSGYESITQRLLDA 167
Fly 168 GADGRSHAVTKYSPLYAAVHSGHLGIARLMLDHFPELIQQPTVERWLPLHAACINGHIKLLELLI 232
Fly 233 SYSYPDYLYQTYRDEEGQWEWRLPFDANAHDVTGQTSLYIASILGNKQLVGVLLKWQLHCRRTLG 297
Fly 298 DSASSVSTPITPTRKRISFGIQAIMSKLHISGES-----------EGPDDLASQESTECQRCPIN 351
Fly 352 VNLLCGAARETALLAAVRGGHLDVVQSLLQHGANPNIVAKPVEDHNDPKCCEEIYGLSNVPIAEA 416
Fly 417 CKQRSLAMLDLLLKHGA 433 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrrk | NP_001262772.1 | Ank_2 | 111..200 | CDD:289560 | 30/88 (34%) |
ANK | 146..286 | CDD:238125 | 36/139 (26%) | ||
ANK repeat | 146..177 | CDD:293786 | 11/30 (37%) | ||
Ank_4 | 179..232 | CDD:290365 | 15/52 (29%) | ||
ANK repeat | 179..209 | CDD:293786 | 8/29 (28%) | ||
Ank_2 | 216..389 | CDD:289560 | 41/183 (22%) | ||
ANK | 361..477 | CDD:238125 | 23/73 (32%) | ||
ANK repeat | 361..390 | CDD:293786 | 9/28 (32%) | ||
Ank_2 | 364..464 | CDD:289560 | 21/70 (30%) | ||
ANK repeat | 406..435 | CDD:293786 | 11/28 (39%) | ||
ANK repeat | 437..464 | CDD:293786 | |||
LRR_8 | <544..580 | CDD:290566 | |||
leucine-rich repeat | 547..569 | CDD:275380 | |||
LRR_8 | 569..629 | CDD:290566 | |||
leucine-rich repeat | 570..595 | CDD:275380 | |||
leucine-rich repeat | 596..618 | CDD:275380 | |||
leucine-rich repeat | 619..641 | CDD:275380 | |||
leucine-rich repeat | 642..676 | CDD:275380 | |||
leucine-rich repeat | 677..730 | CDD:275380 | |||
LRR_8 | 729..788 | CDD:290566 | |||
leucine-rich repeat | 731..754 | CDD:275380 | |||
LRR_8 | 855..933 | CDD:290566 | |||
leucine-rich repeat | 855..901 | CDD:275380 | |||
leucine-rich repeat | 902..924 | CDD:275380 | |||
leucine-rich repeat | 925..949 | CDD:275380 | |||
P-loop_NTPase | 993..1211 | CDD:304359 | |||
COR | 1230..1471 | CDD:292713 | |||
STYKc | 1796..2092 | CDD:214568 | |||
STKc_LRRK | 1801..2095 | CDD:270902 | |||
Ripk4 | NP_001100573.1 | STKc_RIP4_like | 25..290 | CDD:270927 | |
TyrKc | 26..279 | CDD:197581 | |||
ANK repeat | 442..470 | CDD:293786 | 3/27 (11%) | ||
Ank_2 | 444..536 | CDD:289560 | 25/113 (22%) | ||
ANK | 471..591 | CDD:238125 | 39/141 (28%) | ||
ANK repeat | 473..503 | CDD:293786 | 7/35 (20%) | ||
ANK repeat | 505..536 | CDD:293786 | 13/46 (28%) | ||
ANK repeat | 538..569 | CDD:293786 | 11/30 (37%) | ||
Ank_2 | 544..634 | CDD:289560 | 29/110 (26%) | ||
ANK repeat | 571..602 | CDD:293786 | 8/30 (27%) | ||
ANK | 600..725 | CDD:238125 | 43/193 (22%) | ||
ANK repeat | 605..636 | CDD:293786 | 11/51 (22%) | ||
Ank_2 | 610..701 | CDD:289560 | 29/141 (21%) | ||
ANK repeat | 638..669 | CDD:293786 | 10/36 (28%) | ||
ANK repeat | 671..701 | CDD:293786 | 8/41 (20%) | ||
Ank_2 | 676..766 | CDD:289560 | 32/120 (27%) | ||
ANK | 731..>766 | CDD:238125 | 13/39 (33%) | ||
ANK repeat | 736..766 | CDD:293786 | 11/34 (32%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0192 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |