Sequence 1: | NP_001262772.1 | Gene: | Lrrk / 42447 | FlyBaseID: | FBgn0038816 | Length: | 2513 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_492839.4 | Gene: | lrk-1 / 172995 | WormBaseID: | WBGene00003068 | Length: | 2393 | Species: | Caenorhabditis elegans |
Alignment Length: | 2596 | Identity: | 817/2596 - (31%) |
---|---|---|---|
Similarity: | 1248/2596 - (48%) | Gaps: | 488/2596 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 75 CAVRHKTAWINDHKNVA---IDFPQFNAREEVRQIKHGELRTAVISGDERTVRVL---LAALGTE 133
Fly 134 RQIIVNMAPSGANTLLFLACQSGYESITQRLLDAGADGRSHAVTKYSPLYAAVHSGHLGIARLML 198
Fly 199 DHFPELIQQPTVERWLPLHAACINGHIKLLELLISYSYP-DYLYQTYRDEEGQWEWRLPFDANAH 262
Fly 263 DVTGQTSLYIASILGNKQLVGVLLKWQLHCRRTLGDSASSVSTPITPTRKRISFGIQAIMSKLHI 327
Fly 328 SGESEGPDDLASQESTECQRCPINVNLLCGAARETALLAAVRGGHLDVVQSLLQHGANPNIVAKP 392
Fly 393 VEDHNDPKCCEEIYGLSNVPIAEACKQRSLAMLDLLLKHGARDDNGTAIGMAITCGDEAILSRLL 457
Fly 458 ARRVHPDSDYKINKKGLPT-PVEV-NVFLPSTSNISYSAMFPNNPTIIDWHSMGSSVQLSVVRVP 520
Fly 521 WMVSGVLLLNPKLQSHPRLNEVALTAITRIDFSHNVLTSIPQELFHLVSLRYLNVAQNKITDLPA 585
Fly 586 PIGQTY--GCPVLDELFLQDNQLTTLPAA-IFHLPALSILDVSNNKLQQLPFDLWRAPKLRELNV 647
Fly 648 AFNLLRDLPV---------PPMQTSSSLLSLDKLNLQS---------FEEPPSNKPRNVTQQRLT 694
Fly 695 HRNLWSATLDIT--DNDMKWQHEQDLGDGKTAGVGSSQLSSLNIANNLFTSIPAALPCLAVNLTR 757
Fly 758 LNMSYNSLRSMGHVTSYPATLKQLDLSHNEISCWPSLPRITESDP-HLLCYSC-------VQLPE 814
Fly 815 GRDDDYKTASSKGSSSSATSFRASVLK-----------SVCRHRRHLRLEALRTLILADNLLTRI 868
Fly 869 QLSTDDATTLFNESEDADWSVVGVNRSKVIFPNLSMLDMTNNCLKEIPASLHELSSLSVLNISGN 933
Fly 934 VNITELPPHLGLLSRLWNLNTRGCLLQEPLRSMIESKKHKTMDIVGYLKSIYEDAQPYARMKLMV 998
Fly 999 VGVAGIGKSTLLDLLRQGAGSGSSSSSHRSRASENHWAKRMGHARSTSRSHRHSSASSANISTVG 1063
Fly 1064 VDIGTWICE-KRKRAPGSHGPVVFRTWDFGGQKEYYATHQYFLSKRSLYLVLWRISDGHKGLAEL 1127
Fly 1128 LQWLGNIQARAPNSPVIIVGTHFDAVGESIS---PQKAEQLQQLIREKFIAIPDAEKIGLPRVID 1189
Fly 1190 SIEISCRTLHNIHLLANIIYDTAMQLRSPGSKEPMLLQKIPASYIALEDIVNVIACNLRAAGRDP 1254
Fly 1255 VLDGEQYKRLVTEQMRLHNYKSFRDAAELQQATTWCHENGVLLHYDDATLRDYYFLDPQWLCDML 1319
Fly 1320 AHVVTVREINPFAPTGVMKLDDLQMLFRSVQVQGNGN----RSYIVSLLNKFEVALTWDSRTLLI 1380
Fly 1381 PSLLPSQ-EAATPNSGSTVKLSQRSRGRSLGC-SVSQEVNLNNLIYEQRSAPSSSSSSASV---- 1439
Fly 1440 ------SQGLRRILLMTYFPSGFWSRLITRILADEQIIEAIRGVYM-ASQDYADF-DLRTSLEQD 1496
Fly 1497 TQWNLWQTGLALYYGPILIFKIWE-VPFQKTERTQPFRTDGNRFKLKQDGIWSDVNLSSSSILEV 1560
Fly 1561 YFPLYEVNIS----QEVDDNERQLLAEIRPHMSQVAKLLALTVDHIDLLLEDWYPSLGTRFVHTS 1621
Fly 1622 EGRFLITRLVLCPRCLWKLQLQQNNEPSDREVPPVGCNRPSRSSRRGAGAYFLHGVGDPGEDGAL 1686
Fly 1687 NVFSAYLNATARRERRSEDSLGAGSDADSGVGPDSAGS----SRNTSVDGHPGYHLPDNSNVCYA 1747
Fly 1748 WMIEECILSVYNQSKISCPVHLEQSMAQLAPDVIFADIPDKHTIPSECIIKGSLLGRGAFGFVFK 1812
Fly 1813 ANCKVRGARSFKPVAMKMLQPVPPGARAKESALMAFKVAVGKWDRDPLQHSCKAYCTARQELAVL 1877
Fly 1878 LTLKHPNIVPLVGICIKPLALVLELAPLGGLDALLRHYRRSGAHMGPHTFQTLVLQAARAIEYLH 1942
Fly 1943 RRRIIYRDLKSENVLVWELPQPHTEDSPRNLVHIKIADYGISRQTAPS-GAKGFGGTEGFMAPEI 2006
Fly 2007 IRYNGEEEYTEKVDCFSFGMFIYENISLRQPFEGHESIKECILEGSRPALTQRETQFPTCCLDLM 2071
Fly 2072 VLCWHEQPRRRPTASQIVSILSAPECIHLLDVV----AMPHSEKIVCGVFQSLVGMGDDERCGLE 2132
Fly 2133 LWLPSFGSRIDILDCSPSGSLLQCNSISCSPQPQVAPPKTPENGAN-SRARSAQRLPKMNMLCCC 2196
Fly 2197 LVGEAIWMGDVSGNLHAYSTSTYAHLFSYMLDPNIKSAVISLVYMEKIARVAVGTHNGRVFLVDA 2261
Fly 2262 TQMPSN---CAFAEGSFVLTEIC-SGFVLHAACSVVVDGIYE--------------LWCGEIAGK 2308
Fly 2309 INVFPLNENGVSGHQALCHSEEPNLIEDVKVARM---CSNESHVFSCLYPGCMVYQWDVISKRIE 2370
Fly 2371 NKLDCSKLLPCSESLQSIAID-EHVNLIKCQISALAAHN-SELYIGTTWGCLIVAELHTLRPISV 2433
Fly 2434 FRPYENEIKSI-----------------------------------------------ITLSKDN 2451
Fly 2452 VPLIATIGRRYRSLISRYVDSAESSTKSSAVSTPTHGAAKSVPPADVDNHIHCLLWRAKHW 2512 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrrk | NP_001262772.1 | Ank_2 | 111..200 | CDD:289560 | 24/91 (26%) |
ANK | 146..286 | CDD:238125 | 36/140 (26%) | ||
ANK repeat | 146..177 | CDD:293786 | 8/30 (27%) | ||
Ank_4 | 179..232 | CDD:290365 | 14/52 (27%) | ||
ANK repeat | 179..209 | CDD:293786 | 9/29 (31%) | ||
Ank_2 | 216..389 | CDD:289560 | 34/173 (20%) | ||
ANK | 361..477 | CDD:238125 | 33/116 (28%) | ||
ANK repeat | 361..390 | CDD:293786 | 9/28 (32%) | ||
Ank_2 | 364..464 | CDD:289560 | 26/99 (26%) | ||
ANK repeat | 406..435 | CDD:293786 | 7/28 (25%) | ||
ANK repeat | 437..464 | CDD:293786 | 6/26 (23%) | ||
LRR_8 | <544..580 | CDD:290566 | 19/35 (54%) | ||
leucine-rich repeat | 547..569 | CDD:275380 | 10/21 (48%) | ||
LRR_8 | 569..629 | CDD:290566 | 25/62 (40%) | ||
leucine-rich repeat | 570..595 | CDD:275380 | 10/26 (38%) | ||
leucine-rich repeat | 596..618 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 619..641 | CDD:275380 | 11/21 (52%) | ||
leucine-rich repeat | 642..676 | CDD:275380 | 11/42 (26%) | ||
leucine-rich repeat | 677..730 | CDD:275380 | 12/54 (22%) | ||
LRR_8 | 729..788 | CDD:290566 | 23/58 (40%) | ||
leucine-rich repeat | 731..754 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 855..933 | CDD:290566 | 25/77 (32%) | ||
leucine-rich repeat | 855..901 | CDD:275380 | 13/45 (29%) | ||
leucine-rich repeat | 902..924 | CDD:275380 | 6/21 (29%) | ||
leucine-rich repeat | 925..949 | CDD:275380 | 15/23 (65%) | ||
P-loop_NTPase | 993..1211 | CDD:304359 | 85/221 (38%) | ||
COR | 1230..1471 | CDD:292713 | 87/256 (34%) | ||
STYKc | 1796..2092 | CDD:214568 | 161/296 (54%) | ||
STKc_LRRK | 1801..2095 | CDD:270902 | 161/294 (55%) | ||
lrk-1 | NP_492839.4 | Ank_2 | 29..121 | CDD:289560 | |
ANK | 51..218 | CDD:238125 | 25/95 (26%) | ||
ANK repeat | 56..88 | CDD:293786 | |||
ANK repeat | 90..121 | CDD:293786 | |||
ANK | 192..337 | CDD:238125 | 37/146 (25%) | ||
ANK repeat | 197..228 | CDD:293786 | 8/30 (27%) | ||
Ank_2 | 202..286 | CDD:289560 | 23/83 (28%) | ||
ANK repeat | 230..262 | CDD:293786 | 10/31 (32%) | ||
Ank_2 | 269..390 | CDD:289560 | 33/172 (19%) | ||
ANK | 312..456 | CDD:238125 | 39/196 (20%) | ||
ANK repeat | 361..390 | CDD:293786 | 9/29 (31%) | ||
Ank_2 | 366..472 | CDD:289560 | 32/109 (29%) | ||
ANK repeat | 398..432 | CDD:293786 | 7/33 (21%) | ||
LRR_RI | <512..>639 | CDD:238064 | 54/133 (41%) | ||
leucine-rich repeat | 534..555 | CDD:275380 | 9/20 (45%) | ||
LRR_8 | 554..615 | CDD:290566 | 25/63 (40%) | ||
leucine-rich repeat | 556..580 | CDD:275380 | 10/26 (38%) | ||
leucine-rich repeat | 581..604 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 605..627 | CDD:275380 | 11/21 (52%) | ||
leucine-rich repeat | 628..654 | CDD:275380 | 8/25 (32%) | ||
leucine-rich repeat | 655..684 | CDD:275380 | 8/38 (21%) | ||
leucine-rich repeat | 687..718 | CDD:275380 | 7/38 (18%) | ||
LRR_8 | 718..776 | CDD:290566 | 23/57 (40%) | ||
leucine-rich repeat | 719..742 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 743..765 | CDD:275380 | 9/21 (43%) | ||
leucine-rich repeat | 803..856 | CDD:275380 | 12/52 (23%) | ||
LRR_8 | 857..915 | CDD:290566 | 25/77 (32%) | ||
leucine-rich repeat | 857..883 | CDD:275380 | 13/45 (29%) | ||
leucine-rich repeat | 884..906 | CDD:275380 | 6/21 (29%) | ||
leucine-rich repeat | 907..931 | CDD:275380 | 15/23 (65%) | ||
P-loop_NTPase | 977..1160 | CDD:304359 | 83/216 (38%) | ||
COR | <1239..>1336 | CDD:292713 | 41/101 (41%) | ||
S_TKc | 1698..1983 | CDD:214567 | 159/288 (55%) | ||
PKc_like | 1699..1990 | CDD:304357 | 161/294 (55%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160157807 | |
Domainoid | 1 | 1.000 | 262 | 1.000 | Domainoid score | I1044 |
eggNOG | 1 | 0.900 | - | - | E2759_KOG0192 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H70945 | |
Inparanoid | 1 | 1.050 | 1027 | 1.000 | Inparanoid score | I141 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG45565 | |
OrthoDB | 1 | 1.010 | - | - | D10820at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0007008 | |
OrthoInspector | 1 | 1.000 | - | - | oto18392 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_105040 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2620 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
14 | 13.700 |