Sequence 1: | NP_001262772.1 | Gene: | Lrrk / 42447 | FlyBaseID: | FBgn0038816 | Length: | 2513 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002932250.3 | Gene: | lrrk2 / 100145062 | XenbaseID: | XB-GENE-5768572 | Length: | 2514 | Species: | Xenopus tropicalis |
Alignment Length: | 2725 | Identity: | 587/2725 - (21%) |
---|---|---|---|
Similarity: | 937/2725 - (34%) | Gaps: | 1003/2725 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 87 HKNVAIDFPQFNAREEVRQIKHGELRTAVISGDERTVRVLLAALGTERQIIVNMAPSGANTLLFL 151
Fly 152 ACQSGYES---ITQRLLDAGADGRSHAVTKYSPLYAAVHSGHLGIARLMLDHFPELIQQ------ 207
Fly 208 -------PTVERWLPL-----------------------------HAA----------CINGHIK 226
Fly 227 LLELLISYSYPDYLYQTYRDEEGQWEWRLPFDANAHDVTGQTSLYIASILGNKQLVGVLLKWQLH 291
Fly 292 CRRTLGDSASS-VSTPITPTRKRISFGIQ----------AIMSKLHISGESEGPDD--------- 336
Fly 337 ---LASQESTECQRCPINVNLLCGAARE---------TALLAAVRGGHLDVVQSLLQHGANPN-- 387
Fly 388 -----IVAKPVEDHNDPKCCEEIYGLSNVPIAEACKQRSLAMLDLLLKHGARD-DNGTAIGMAIT 446
Fly 447 CGDEAILSRLLAR------------------RVHP-------------------DSDYK------ 468
Fly 469 ---------------------------INKKGLPTPVEVNVFLPSTSNISYS------------- 493
Fly 494 ---------------------------AMFPNNPTI---IDWHSM---GSSVQLSVVRVPWMVS- 524
Fly 525 -------------------GVLLLNPKLQSHPRLNEVALTAITRIDFSHNVLTSIPQELFH-LVS 569
Fly 570 LRYLNVAQNKITDLPAPIGQTYGCPVLDELFLQDNQLTTLPAAIFHLPALSILDVSNNKLQQLPF 634
Fly 635 DLWRA----PKLRELNVAFNLLRDLPVPPMQTSSSLLSLDKLNLQSFEEPPSNKPRNVTQQRLTH 695
Fly 696 RNLWSA----------TLDITDNDMKWQHEQDLGDGKTAGVGSSQLSSLNIANNLFTSIPAALPC 750
Fly 751 LAVNLTRLNMSYNSLRSMGHVTSYPATLKQL------DLSHNEISC------WPSLPRITESDPH 803
Fly 804 LLCYSCVQLPEGRDDDYKTASSKGSSSSATSFRASVLKSVCRHRRHLRLEALRTLILADNLLTRI 868
Fly 869 QLSTDDATTLFNESEDADWSVVGVNRSKVIFPNLSMLDMTNNCLKEIPASLHELSSLSVLNISGN 933
Fly 934 VNITELPPHLGLLSRLWNLNTRGCLLQEPLRSMIESKKH---KTMDIVGYLKSIYEDAQPYARMK 995
Fly 996 LMVVGVAGIGKSTLLDLLRQGAGSGSSSSSHRSRASENHWAKRMGHARSTSRSHRHSSASSANIS 1060
Fly 1061 TVGVDIGTW---ICEKRKRAPGSHGPVVFRTWDFGGQKEYYATHQYFLSKRSLYLVLWRISDGHK 1122
Fly 1123 GLAELLQWLGNIQARAPNSPVIIVGTHFDAVGESISPQKAEQL------QQLIREKFIAIPDAEK 1181
Fly 1182 IGLPRVIDSIEISCRTLHNIHLLANIIYDTAMQLRSPGSKE---------PMLLQKIPASYIALE 1237
Fly 1238 DIVNVIACNLRAAGRDPVLDGEQYKRLVTEQMRLHNYKSFRDAAELQQATTWCHENGVLLHYDDA 1302
Fly 1303 T--LRDYYFLDPQWLCDMLAHVVTVREIN-PFAPTGVMKLDDLQMLFRSVQVQGNGNRSYIVSLL 1364
Fly 1365 NKFEVALTWDSRTLLIPSLLPSQEAATPNSGSTVKLSQRSRGRSLGCSVSQEVNLNNLIYEQRSA 1429
Fly 1430 PSSSSSSASVSQGLRRILLMTYFPSGFWSRLITRILADEQIIEAIRGVYMASQDYADFDLRTSLE 1494
Fly 1495 QDTQWN--LWQTGLALYYGPILIFKIWEVPFQKTERTQPFRTDGNRFKLKQDGIWSDVNLSSSSI 1557
Fly 1558 LEVYFPLYEVNISQEVDDNERQLLAEIRPHMSQVAKLLALTVDHIDLLLEDWYPSLGTRFVHTSE 1622
Fly 1623 GRFLITRLVLCPRCLWKLQLQQNNEPSDREVPPVGCNRPSRSSRRGAGAYFLHGVGDPGEDGALN 1687
Fly 1688 VFSAYLNATARRERRSEDSLGAGSDADSGVGPDSAGSSRNTSVDGHPGYHLPDNSNVCYAWMIEE 1752
Fly 1753 CILSVYNQSKISCPVHLEQSMAQLAPDVIFADIPDKHTIPSECI----IKGSLLGRGAFGFVFKA 1813
Fly 1814 NCKVRGARSFKPVAMKMLQPVPPGARAKESALMAFKVAVGKWDRDPLQHSCKAYCTARQELAVLL 1878
Fly 1879 TLKHPNIVPLVGICIKPLALVLELAPLGGLDALLRHYRRSGAHMGPHTFQTLVLQAARAIEYLHR 1943
Fly 1944 RRIIYRDLKSENVLVWELPQPHTEDSPRNLVHIKIADYGISRQTAPSGAKGFGGTEGFMAPEIIR 2008
Fly 2009 YNGEEEYTEKVDCFSFGMFIYENIS--------LRQPFEGHESIKECILEGSRPALTQRETQFPT 2065
Fly 2066 CCLDLMV-LCWHEQPRRRPTASQIVSILSAPECIHLLDVVAMPHSEKIVCGVFQS--------LV 2121
Fly 2122 GMGDDERCGLELWLPSFGSRIDILDCSPSGSLLQCNSISCSPQPQVAPPKTPENGANSRARSAQR 2186
Fly 2187 LPKMNMLCCCLV---GEA---IWMGDVSG--------------NLHAYSTSTYAHLFSYMLDPNI 2231
Fly 2232 KSAVISLVYMEKIARVAVGTHNGRVFLVDATQMPSNCAFAEGSFVLT-EICSGFVLHAACSVVVD 2295
Fly 2296 GIYELWCGEIAGKINVFPLNENGVSGHQALCHSEEPNLIE--DVKVARMCS----NESHVFSCLY 2354
Fly 2355 PGCMVYQ----------WDVISKRIENKLDCSKLLPCSESLQSIAIDEHVNLIKC--------QI 2401
Fly 2402 SAL-AAHNSELYIGTTWGCLIVAELHTLRPISVFRPYENEIKSIITLSKD-----NVPLI 2455 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrrk | NP_001262772.1 | Ank_2 | 111..200 | CDD:289560 | 20/91 (22%) |
ANK | 146..286 | CDD:238125 | 30/194 (15%) | ||
ANK repeat | 146..177 | CDD:293786 | 6/33 (18%) | ||
Ank_4 | 179..232 | CDD:290365 | 15/104 (14%) | ||
ANK repeat | 179..209 | CDD:293786 | 6/42 (14%) | ||
Ank_2 | 216..389 | CDD:289560 | 40/250 (16%) | ||
ANK | 361..477 | CDD:238125 | 33/202 (16%) | ||
ANK repeat | 361..390 | CDD:293786 | 9/44 (20%) | ||
Ank_2 | 364..464 | CDD:289560 | 27/144 (19%) | ||
ANK repeat | 406..435 | CDD:293786 | 5/28 (18%) | ||
ANK repeat | 437..464 | CDD:293786 | 9/63 (14%) | ||
LRR_8 | <544..580 | CDD:290566 | 12/36 (33%) | ||
leucine-rich repeat | 547..569 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 569..629 | CDD:290566 | 14/59 (24%) | ||
leucine-rich repeat | 570..595 | CDD:275380 | 3/24 (13%) | ||
leucine-rich repeat | 596..618 | CDD:275380 | 4/21 (19%) | ||
leucine-rich repeat | 619..641 | CDD:275380 | 8/25 (32%) | ||
leucine-rich repeat | 642..676 | CDD:275380 | 5/33 (15%) | ||
leucine-rich repeat | 677..730 | CDD:275380 | 10/62 (16%) | ||
LRR_8 | 729..788 | CDD:290566 | 18/64 (28%) | ||
leucine-rich repeat | 731..754 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 855..933 | CDD:290566 | 20/77 (26%) | ||
leucine-rich repeat | 855..901 | CDD:275380 | 10/45 (22%) | ||
leucine-rich repeat | 902..924 | CDD:275380 | 8/21 (38%) | ||
leucine-rich repeat | 925..949 | CDD:275380 | 6/23 (26%) | ||
P-loop_NTPase | 993..1211 | CDD:304359 | 64/226 (28%) | ||
COR | 1230..1471 | CDD:292713 | 71/243 (29%) | ||
STYKc | 1796..2092 | CDD:214568 | 93/308 (30%) | ||
STKc_LRRK | 1801..2095 | CDD:270902 | 95/302 (31%) | ||
lrrk2 | XP_002932250.3 | LRR | 957..1273 | CDD:227223 | 89/470 (19%) |
leucine-rich repeat | 977..1004 | CDD:275380 | 3/33 (9%) | ||
leucine-rich repeat | 1005..1028 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 1029..1051 | CDD:275380 | 7/47 (15%) | ||
leucine-rich repeat | 1052..1076 | CDD:275380 | 8/25 (32%) | ||
leucine-rich repeat | 1077..1100 | CDD:275380 | 9/44 (20%) | ||
leucine-rich repeat | 1101..1122 | CDD:275380 | 1/20 (5%) | ||
leucine-rich repeat | 1123..1146 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 1147..1189 | CDD:275380 | 15/58 (26%) | ||
leucine-rich repeat | 1190..1213 | CDD:275380 | 8/81 (10%) | ||
leucine-rich repeat | 1214..1238 | CDD:275380 | 10/45 (22%) | ||
P-loop_NTPase | 1326..1499 | CDD:422963 | 67/237 (28%) | ||
COR | 1516..1732 | CDD:406489 | 78/282 (28%) | ||
STKc_LRRK2 | 1876..2127 | CDD:270970 | 95/302 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 82 | 1.000 | Domainoid score | I8312 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D10820at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm49402 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.920 |