DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lrrk and lrrk1

DIOPT Version :9

Sequence 1:NP_001262772.1 Gene:Lrrk / 42447 FlyBaseID:FBgn0038816 Length:2513 Species:Drosophila melanogaster
Sequence 2:XP_012815031.2 Gene:lrrk1 / 100127675 XenbaseID:XB-GENE-920588 Length:2003 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LrrkNP_001262772.1 Ank_2 111..200 CDD:289560
ANK 146..286 CDD:238125
ANK repeat 146..177 CDD:293786
Ank_4 179..232 CDD:290365
ANK repeat 179..209 CDD:293786
Ank_2 216..389 CDD:289560
ANK 361..477 CDD:238125
ANK repeat 361..390 CDD:293786
Ank_2 364..464 CDD:289560
ANK repeat 406..435 CDD:293786
ANK repeat 437..464 CDD:293786
LRR_8 <544..580 CDD:290566
leucine-rich repeat 547..569 CDD:275380
LRR_8 569..629 CDD:290566
leucine-rich repeat 570..595 CDD:275380
leucine-rich repeat 596..618 CDD:275380
leucine-rich repeat 619..641 CDD:275380
leucine-rich repeat 642..676 CDD:275380
leucine-rich repeat 677..730 CDD:275380
LRR_8 729..788 CDD:290566
leucine-rich repeat 731..754 CDD:275380
LRR_8 855..933 CDD:290566
leucine-rich repeat 855..901 CDD:275380
leucine-rich repeat 902..924 CDD:275380
leucine-rich repeat 925..949 CDD:275380
P-loop_NTPase 993..1211 CDD:304359
COR 1230..1471 CDD:292713
STYKc 1796..2092 CDD:214568
STKc_LRRK 1801..2095 CDD:270902
lrrk1XP_012815031.2 Ank_2 49..137 CDD:403870
Ank_2 117..209 CDD:403870
ANK repeat 147..178 CDD:293786
ANK repeat 180..209 CDD:293786
LRR_8 <261..307 CDD:404697
leucine-rich repeat 274..296 CDD:275380
LRR 295..623 CDD:227223
leucine-rich repeat 297..323 CDD:275380
leucine-rich repeat 324..346 CDD:275380
leucine-rich repeat 347..373 CDD:275380
leucine-rich repeat 374..397 CDD:275380
leucine-rich repeat 398..443 CDD:275380
leucine-rich repeat 444..466 CDD:275380
leucine-rich repeat 467..490 CDD:275380
leucine-rich repeat 491..541 CDD:275380
leucine-rich repeat 542..564 CDD:275380
leucine-rich repeat 565..588 CDD:275380
Roc 632..752 CDD:400669
COR 836..1028 CDD:406489
PKc_like 1239..1515 CDD:419665
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 152 1.000 Domainoid score I4292
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 439 1.000 Inparanoid score I1630
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D10820at33208
OrthoFinder 1 1.000 - - FOG0007008
OrthoInspector 1 1.000 - - otm49402
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2620
SonicParanoid 1 1.000 - - X5893
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.090

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