DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pus1 and PUS2

DIOPT Version :9

Sequence 1:NP_001163664.1 Gene:Pus1 / 42440 FlyBaseID:FBgn0038811 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_011452.4 Gene:PUS2 / 852817 SGDID:S000003031 Length:370 Species:Saccharomyces cerevisiae


Alignment Length:370 Identity:111/370 - (30%)
Similarity:166/370 - (44%) Gaps:92/370 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 ILLSYCGANYYGMQRNPGMQTIEEELFKAMLKHKWITEDSFEQIQISCFQRAARTDKGVSAARQV 170
            :||.|||:.|||||.||..:|||.|:...:.....|:|::....:.:.|..||||||||.|...:
Yeast     1 MLLGYCGSGYYGMQYNPPHKTIEGEILTKLFDVGAISEENSLAPKKNSFMAAARTDKGVHAMLNL 65

  Fly   171 CSVKLPEELDLEA-FNADLPQQIRLFGVERVTKGFNAKDQCNARTYTYTLPT-VAFAP------- 226
            .|:|:....|..| .||.||.:||::|::.|.|.|||:..|::|.|.|.:|. :...|       
Yeast    66 LSLKITLREDTVAKLNAALPPEIRVWGIQPVNKKFNARSACDSRWYQYLIPEFILIGPPRSSLLH 130

  Fly   227 -------FEEKVDDVHDTFR--------------------------------------------I 240
                   .|:...:|.|||.                                            :
Yeast   131 RNVGGCYREDGSQEVWDTFLEQTRGRFSGDELCRLQDTAQKLSESDPLVQDYVGLLSGTLSGYCL 195

  Fly   241 SPELLQKVKETLKLYEGTKNFHNFTSKKSFLDPSSKRFIMSFTSSEPFRSPQDIEFVTLKVKGQS 305
            ||..|...:..::.|.||.||||||:.|.:.|||::|.|.....|:  .||   .::.:::.|||
Yeast   196 SPSKLDAFEAAMQEYVGTHNFHNFTTGKLWGDPSAQRHIKKVVVSQ--ASP---GWICVRIHGQS 255

  Fly   306 FMLHQIRKMVGLAIA---------IVRGNTTAATLERALTEERLDLPMAPGLGLVLDTVHYERYN 361
            |||||||:||.||:.         |||....|.        .|..:|.||..||:|:...::.||
Yeast   256 FMLHQIRRMVALAVLAARCQLPPNIVRNYFNAG--------PRKYIPRAPAQGLLLEGPVFDGYN 312

  Fly   362 DRYGKDGIHNPLTWQAQEAQVQ-----EFIEREIFSQIYKTEAEQ 401
            .:     :.|.|..:.:...:.     .|.||:|.:.|...|.::
Yeast   313 TK-----LRNLLYCEIRPDDITLERMCRFRERQICTAIAHEETQR 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pus1NP_001163664.1 TruA 102..362 CDD:223179 102/324 (31%)
PseudoU_synth_PUS1_PUS2 106..357 CDD:211335 101/319 (32%)
PUS2NP_011452.4 PseudoU_synth_PUS1_PUS2 1..308 CDD:211335 101/319 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344104
Domainoid 1 1.000 87 1.000 Domainoid score I1840
eggNOG 1 0.900 - - E1_COG0101
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I951
Isobase 1 0.950 - 0 Normalized mean entropy S2250
OMA 1 1.010 - - QHG54496
OrthoFinder 1 1.000 - - FOG0002248
OrthoInspector 1 1.000 - - otm46966
orthoMCL 1 0.900 - - OOG6_101974
Panther 1 1.100 - - O PTHR11142
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4457
SonicParanoid 1 1.000 - - X1684
TreeFam 1 0.960 - -
1514.740

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