DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pus1 and AT3G06950

DIOPT Version :10

Sequence 1:NP_001163664.1 Gene:Pus1 / 42440 FlyBaseID:FBgn0038811 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_187351.2 Gene:AT3G06950 / 819880 AraportID:AT3G06950 Length:323 Species:Arabidopsis thaliana


Alignment Length:297 Identity:77/297 - (25%)
Similarity:130/297 - (43%) Gaps:47/297 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 KSAILLSYCGANYYGMQRNPGMQTIEEELFKAMLKHKWITEDSFEQIQISCFQRAARTDKGVSAA 167
            |..::::|.|..:.|.|......||:..|.||:::   |||...:::|:.   .|.|||.||.|.
plant    42 KWRLVIAYDGTRFAGWQYQESPPTIQSMLEKALIQ---ITELGRKELQLI---GAGRTDAGVHAW 100

  Fly   168 RQVCSVKLP-EELDLEAFNAD----LPQQIRLFGVERVTKGFNAKDQCNARTYTYTLPTVAFA-P 226
            .||.....| ....|::|:|.    ||:.||:..:......|:|:...:::.|.|.:....|. |
plant   101 GQVAHFVTPFNYTSLDSFHAALNGLLPKDIRVRELSAAVPEFHARFSASSKVYRYQIYNDTFMDP 165

  Fly   227 FEEKVDDVHDTFRISPEL-LQKVKETLKLYEGTKNFH---NFTSKKSFLDP--SSKRFIMSFTSS 285
            |:.     |..:..:.:| ..|::|...|:.|..:|.   |.|.:....||  :..||.:....|
plant   166 FQR-----HWAYHCAYKLNASKMREAANLFVGKHDFSAFANATREDGVPDPLKTISRFDVIQMGS 225

  Fly   286 EPFRSPQDIEFVTLKVKGQSFMLHQIRKMVGLAIAIVRGNTTA-------ATLERALTEERLDLP 343
                      .:.|:|:|..|:..|:|.||.|.|.|.:....:       .|.:|.:..:...||
plant   226 ----------LLQLEVEGSGFLYRQVRNMVALLIQIGKEALDSDIVPMILETKDRRVLAKYTSLP 280

  Fly   344 MAPGLGLVLDTVHYERYNDRYGKD------GIHNPLT 374
            .:|. ||.|.:|.|:..:.:...|      |.|:.:|
plant   281 ASPH-GLCLVSVKYKEDHLKLPLDCPVTSSGRHHTIT 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pus1NP_001163664.1 PseudoU_synth_PUS1_PUS2 106..357 CDD:211335 71/269 (26%)
AT3G06950NP_187351.2 PseudoU_synth_EcTruA 45..293 CDD:211337 71/269 (26%)

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