DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pus1 and AT2G30320

DIOPT Version :9

Sequence 1:NP_001163664.1 Gene:Pus1 / 42440 FlyBaseID:FBgn0038811 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_180591.1 Gene:AT2G30320 / 817582 AraportID:AT2G30320 Length:510 Species:Arabidopsis thaliana


Alignment Length:459 Identity:108/459 - (23%)
Similarity:176/459 - (38%) Gaps:127/459 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 DPADRIKRKKSAILLSYCGANYYGMQ---RNPGMQTIEEELFKAMLKHKWITEDSFEQIQISCFQ 155
            |..:..::||..|.:.|.|.:|.|:|   .:|.::|||.||..|:.|...|.:.::..:....:.
plant    55 DKWESYRKKKVVIRIGYVGTDYRGLQIQRDDPSIKTIEGELEVAIYKAGGIRDSNYGDLHKIGWA 119

  Fly   156 RAARTDKGVSAARQVCSVKLPEELDLEAFNAD-------------LPQQIRLFGVERVTKGFNAK 207
            |::||||||.:.  ..|:.|..|:...|:..|             ||:.||:|.|....:.|:.:
plant   120 RSSRTDKGVHSL--ATSISLKMEIPETAWKDDPQGTVLAKCISKHLPENIRVFSVLPSNRRFDPR 182

  Fly   208 DQCNARTYTYTLPTVAFA---PFEEKVDDVHDTFRISPELLQKVKETLKLYEGTKNFHNFTSKKS 269
            .:|..|.|:|.||.....   .|.....|.|.|         ...|.||.:||...|||:|.:..
plant   183 RECTLRKYSYLLPVDVLGIKNSFTSDEIDYHIT---------DFNEILKEFEGEYPFHNYTQRSR 238

  Fly   270 FLDPSSKRFIM----------SFTSSE-PFRSPQDIE---------------------------- 295
            :...|.::...          |..:|| .||....||                            
plant   239 YRRKSEQKIKQRNGRPPREPKSIKASESEFREENHIEIGEEEEEKEVDGESDEHVVTPDSDNSQV 303

  Fly   296 ---------------------------------------FVTLKVKGQSFMLHQIRKMVGLAIAI 321
                                                   ||.:.:.|:||||||||||:|.|:|:
plant   304 YSRAKWLYEPDETDKISGAHFRKVFRCRSGKLENSLGFGFVEISIWGESFMLHQIRKMIGTAVAV 368

  Fly   322 VRGNTTAATLERALTE-ERLDLPMAPGLGLVL--DTVHYERYNDRYGKDGIHNPLTWQAQEA--Q 381
            .|.......:..:|.: .|:.||:||...|:|  ::....|..:|.|.:.     |.:::|.  :
plant   369 KRELLPRDIIRLSLNKFTRIVLPLAPSEVLILRGNSFEVRRLPERPGMEA-----TGESEEVEKE 428

  Fly   382 VQEFIEREIFSQI-YKTEAEQRNMLDWIGTLHYHS--YDTRTEDAPPPSSEDK------KVKGGD 437
            ::||....:..|: ...::|:....:|:..|..:.  .|...||......|.|      .:|..:
plant   429 IEEFYRAVMVPQVSIFLDSEKSPWKEWVDHLDRNDGLIDEELEDVRKGWEEWKAAKPWMNLKKTE 493

  Fly   438 DDND 441
            ||.:
plant   494 DDEE 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pus1NP_001163664.1 TruA 102..362 CDD:223179 89/359 (25%)
PseudoU_synth_PUS1_PUS2 106..357 CDD:211335 86/350 (25%)
AT2G30320NP_180591.1 PLN03078 2..497 CDD:215562 108/457 (24%)
PseudoU_synth_PUS1_PUS2 67..405 CDD:211335 86/348 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 63 1.000 Domainoid score I3725
eggNOG 1 0.900 - - E1_COG0101
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D710785at2759
OrthoFinder 1 1.000 - - FOG0002248
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.780

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