DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pus1 and CG3045

DIOPT Version :10

Sequence 1:NP_001163664.1 Gene:Pus1 / 42440 FlyBaseID:FBgn0038811 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_611646.1 Gene:CG3045 / 37531 FlyBaseID:FBgn0034703 Length:499 Species:Drosophila melanogaster


Alignment Length:439 Identity:99/439 - (22%)
Similarity:175/439 - (39%) Gaps:89/439 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 HKSFAAAMSEALDKLEVEKEARKEAKELEGEAVKDANRIKRTLKRKKWVDWKE------------ 78
            :|.......|||:|| .:.|...:..:||....:..|.:::.|..|...| ||            
  Fly    12 NKRLKGLSREALEKL-TQTELIDKVIQLEAYNFQLRNLLQKKLSEKDKHD-KEYSGLIGNEAEGK 74

  Fly    79 --QDEKDAANGVKRAPFDPADRIKRKKSAILL--SYCGANYYGMQ-RNPGMQTIEEELFKAMLKH 138
              |..|.::...|...||.:...||.   :||  :|.|.:|.|.. :.....|||..||:|:.:.
  Fly    75 VSQVAKTSSKVQKIRKFDWSSAHKRH---VLLKITYFGWDYQGFACQEDSNDTIESNLFRALART 136

  Fly   139 KWITEDSFEQIQISCFQRAARTDKGVSAARQVCSVKL-----PE-ELDLEAFNAD---------- 187
            ..|     |....|.:.|..||||.|||..||.|:.|     || :||..|.:::          
  Fly   137 CLI-----ESRATSNYHRCGRTDKEVSAFCQVISIDLRSKHPPESQLDPTALSSEIDYCGLLNRV 196

  Fly   188 LPQQIRLFG-VERVTKGFNAKDQCNARTYTYTLPTVAFAPFEEKVDDVHDTFRISPELLQKVKET 251
            ||:.|:... :...:..::|:..|.:|||.|..|         |.|       :....::|..:.
  Fly   197 LPKNIQCVAWMPLRSPVYSARFDCVSRTYRYYFP---------KGD-------LDIAAMRKACDL 245

  Fly   252 LKLYEGTKNF-----HNFTSKKSFLDPSSKRFIMSFTSSEPFRSPQDIEFVTLKVKGQSFMLHQI 311
            |..:...:||     ||..:  :::.......:.:...:....|..|:.:  |:::..:|:.|||
  Fly   246 LVRHADFRNFCKMDVHNGVT--NYMRNLQSARVEACDQTNHTNSGYDMYY--LEIQANAFLWHQI 306

  Fly   312 RKMVGLAIAIVRGNTTAATLERAL-TEERLDLPM-APGLGLVLDTVHYERYNDRYGKDGIHNPLT 374
            |.::.:.:.:.:.......:...| .|.....|. .|.:||.|:....: :.|...: .:::|.:
  Fly   307 RCIMAVLLLVGQKKENPGVISDLLDVESNPCKPQYTPAIGLPLNLFRCD-FRDHTTR-SVNHPSS 369

  Fly   375 WQAQEAQVQ------------EFIEREIFSQIYKTEAEQR----NMLDW 407
            ..|.|..:.            |.:||::.:.||..|..|:    ...:|
  Fly   370 GDADEEAMDTAADESNDLNAPEHLERDLTAWIYNEENLQKLIENTQCEW 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pus1NP_001163664.1 PseudoU_synth_PUS1_PUS2 106..357 CDD:211335 65/277 (23%)
CG3045NP_611646.1 PseudoU_synth_ScPus3 103..356 CDD:211336 64/278 (23%)

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