DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pus1 and Pus1

DIOPT Version :10

Sequence 1:NP_001163664.1 Gene:Pus1 / 42440 FlyBaseID:FBgn0038811 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_001020734.1 Gene:Pus1 / 304567 RGDID:1311871 Length:423 Species:Rattus norvegicus


Alignment Length:386 Identity:172/386 - (44%)
Similarity:247/386 - (63%) Gaps:28/386 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 RKKWVDWKEQDEKDAANGVKRA-PFDPADRIKRKKSAILLSYCGANYYGMQRNPG---MQTIEEE 130
            |..|| |:|.:.  .|..||.. ..:|..::.::|..:|::|.|..|:|||||.|   .:|||::
  Rat    50 RGGWV-WEETEH--PAKRVKGGEDEEPPRKLPKRKIVLLMAYSGKGYHGMQRNLGSSQFRTIEDD 111

  Fly   131 LFKAMLKHKWITEDSFEQIQISCFQRAARTDKGVSAARQVCSVK--LPEELDLEAFNADLPQQIR 193
            |..|:::...|.|:....::...|||.||||||||||.||.|:|  |.::: |:..|:.||..||
  Rat   112 LVSALVQAGCIPENHGTDMRKMSFQRCARTDKGVSAAGQVVSLKVWLIDDI-LDKINSHLPSHIR 175

  Fly   194 LFGVERVTKGFNAKDQCNARTYTYTLPTVAFAPFEEKVDDVHDTFRISPELLQKVKETLKLYEGT 258
            :.|::|||.|||:|::|:||||.|.|||.|||..:..|.|  :::|:|.|.||:|...|..|:||
  Rat   176 ILGLKRVTGGFNSKNKCDARTYCYMLPTFAFAHKDRDVQD--ESYRLSAETLQQVNRLLGCYKGT 238

  Fly   259 KNFHNFTSKKSFLDPSSKRFIMSFTSSEPFRSPQDIEFVTLKVKGQSFMLHQIRKMVGLAIAIVR 323
            .|||||||:|...:||::|:|:.....||| ..:.:||..:||||||||:|||||||||.:|||:
  Rat   239 HNFHNFTSQKGPREPSARRYILEMYCEEPF-VREGLEFAVIKVKGQSFMMHQIRKMVGLVVAIVK 302

  Fly   324 GNTTAATLERALTEERLDLPMAPGLGLVLDTVHYERYNDRYGKDGIHNPLTWQAQEAQVQEFIER 388
            |....:.|||:..||::|:|.||||||||:.||:|:||.|:|.||:|.||.|..:|.:|..|.|:
  Rat   303 GYAPESVLERSWGEEKVDVPKAPGLGLVLERVHFEKYNQRFGSDGLHEPLDWAQEEGKVTAFKEQ 367

  Fly   389 EIFSQIYKTEAEQRNMLDWIGTLHYHSY--------DTRTEDAPPPSSEDKKVKGGDDDND 441
            .|:..|..||.::|:|..|:.||..|::        ||   .|..|||    ::|.:.|.|
  Rat   368 YIYPTIVSTERDERSMAQWLNTLPIHNFSGTALGADDT---GAKVPSS----LEGSEGDGD 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pus1NP_001163664.1 PseudoU_synth_PUS1_PUS2 106..357 CDD:211335 127/255 (50%)
Pus1NP_001020734.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 32..75 8/25 (32%)
PseudoU_synth_PUS1_PUS2 84..336 CDD:211335 126/256 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 401..423 7/21 (33%)

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