DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pus1 and PUSL1

DIOPT Version :9

Sequence 1:NP_001163664.1 Gene:Pus1 / 42440 FlyBaseID:FBgn0038811 Length:442 Species:Drosophila melanogaster
Sequence 2:XP_024308825.1 Gene:PUSL1 / 126789 HGNCID:26914 Length:394 Species:Homo sapiens


Alignment Length:143 Identity:39/143 - (27%)
Similarity:59/143 - (41%) Gaps:27/143 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 PADRIKRKKSAILLSYCGANYYGM------QRNPGMQTIEEELFKAMLKHKWITEDSFEQIQISC 153
            ||....|.:..:...|.|.::.|:      ||..|:|...||..:.:        :|.|.::   
Human     5 PASGSVRARYLVYFQYVGTDFNGVAAVRGTQRAVGVQNYLEEAAERL--------NSVEPVR--- 58

  Fly   154 FQRAARTDKGVSAARQVCSVKL---------PEELDLEAFNADLPQ-QIRLFGVERVTKGFNAKD 208
            |..::|||.||.|......:.:         |.|:..||.|..|.. .||:....||...|:|:.
Human    59 FTISSRTDAGVHALSNAAHLDVQRRSGRPPFPPEVLAEALNTHLRHPAIRVLRAFRVPSDFHARH 123

  Fly   209 QCNARTYTYTLPT 221
            ...:|||.|.|.|
Human   124 AATSRTYLYRLAT 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pus1NP_001163664.1 TruA 102..362 CDD:223179 36/136 (26%)
PseudoU_synth_PUS1_PUS2 106..357 CDD:211335 36/132 (27%)
PUSL1XP_024308825.1 PseudoU_synth 18..>158 CDD:320773 36/130 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0101
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.