DRSC/TRiP Functional Genomics Resources

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Protein Alignment Srp72 and Srp72

DIOPT Version :10

Sequence 1:NP_650898.1 Gene:Srp72 / 42439 FlyBaseID:FBgn0038810 Length:650 Species:Drosophila melanogaster
Sequence 2:XP_321122.5 Gene:Srp72 / 1281184 VectorBaseID:AGAMI1_009568 Length:696 Species:Anopheles gambiae


Alignment Length:699 Identity:384/699 - (54%)
Similarity:494/699 - (70%) Gaps:57/699 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKDANPKEALIKAAYADVNKFGNNQEFDKAVKAVNRILGVAPDDPTALHCKVVCLVQLSKFEEA 65
            ||| :..|||.|:..|.::||:.::.::|||:||.|:|:|:...:..|..||:.||:|..|||||
Mosquito     1 MSK-SETKEATIRQLYTELNKYCSSADYDKALKAANKIIGLDATEWKAAKCKLACLIQNGKFEEA 64

  Fly    66 YKFIEK-NRLSSLFFEKAYCEYQLNKQQQALKTIDDAGLQP-----------LPPNLKELRTQVL 118
            .||||: ..:....|||||.||:||:.:.|.:||.  .:.|           |.||||||..|:|
Mosquito    65 IKFIERGTSIPDTTFEKAYSEYRLNRAEDAFRTIQ--AVAPGGGGGADQWAGLAPNLKELLAQIL 127

  Fly   119 YRLERYDECLDSYRDIIKNTSDEYEEERRTNLSAVAANLAV------DQTKEVPEVPEDTYEQYF 177
            |||||:|||.:.||:|||||.|:|::|||||:||||||..:      .|:.....:||||||..:
Mosquito   128 YRLERFDECFELYRNIIKNTHDDYDDERRTNMSAVAANQCIVGSGGKQQSAAATNLPEDTYELTY 192

  Fly   178 NSACIQANRQKYAEAERKLRTSEKLC---LEDECASEEEIIEEVDVIRVQLAYVLQLQGKTKEAS 239
            |:||..|.|::|.|||||||||||:|   ||::.||||:||:|:.:|:|||||.||:||:.||||
Mosquito   193 NAACALAGRREYGEAERKLRTSEKMCRDSLEEDGASEEDIIDEITIIKVQLAYCLQMQGRVKEAS 257

  Fly   240 SIYADCLRHKPKDAALVAVASNNLVVVNKDQNVFDSKKKIRAALADACESRLTSRQKQVIALNNC 304
            ::|||.||||..|.||.||.||||||:|:|||||||:||::.|.::..:.:|||||::.||.|||
Mosquito   258 ALYADALRHKTNDVALTAVVSNNLVVINRDQNVFDSRKKMKVATSEQADQKLTSRQRKTIAFNNC 322

  Fly   305 LLALYTNAGDQVQQLSQKLAQTYPQVEFEALLIRCTQLAKDRKHKEAIEQLQKFA---AAHKSHE 366
            ||| |..:..:...|:.:||..:|.:||::||:|.:|||:|:|::||:|.|:.:|   .|.::.|
Mosquito   323 LLA-YFASPSECGLLASRLANAHPDLEFQSLLVRVSQLARDKKYREAVELLEAYAQRLPAGRTTE 386

  Fly   367 FVS-KFAIIQLQLLQGNRKDAIETLLSLGEAKYKPGVVSALVSLYLGTDNKTAASALLKSAVDWY 430
            .:. :|||:||||:.||||.|||||.|||||:|:||||||||:|:||.|||.|||.:|||||:||
Mosquito   387 LLQVRFAIVQLQLVAGNRKAAIETLESLGEARYQPGVVSALVTLHLGLDNKQAASEILKSAVEWY 451

  Fly   431 KKNE---VSSGDLSDMWRQAAEFHLRGGASETAASSLEELLKLNPNDTKVLAQLVIAYAQFQPKR 492
            |:.:   :|..||||||||||.||||||..||||.||||||:.:|||.|:|||||||||||.|||
Mosquito   452 KRQKSATISDSDLSDMWRQAASFHLRGGEPETAAKSLEELLRTHPNDMKLLAQLVIAYAQFDPKR 516

  Fly   493 ALELSRKLPKLETLTTASEIDALEAANWVMSAKAAKKTANTKV---------EPSPSTPLEK--- 545
            |.:.|::||.||||||.||||||||.||:|.|||.|:..|...         .|...||..:   
Mosquito   517 AQQASKRLPALETLTTVSEIDALEATNWMMIAKAVKRKPNQPAGGGRTTGDQSPGAGTPSAEQQQ 581

  Fly   546 ---KKNRNRKRKGKLPKNYNAEVAPDPERWLPKYERTGFRKKRGGARGKDVIKGSQGMASGAADQ 607
               :|.:.:||||||||||...|.||||||||:|||||:|||| ..|.|::||||||.|||.|||
Mosquito   582 QAARKQKRKKRKGKLPKNYIIGVLPDPERWLPRYERTGYRKKR-DRRVKEIIKGSQGTASGQADQ 645

  Fly   608 YDMSSRVNLTKNSPATP----VYQ-----ETAPGPRQQHRKGGHKKKKG 647
            :|||...|.||||||||    |.|     ..|...||..||..||||||
Mosquito   646 FDMSKAYNQTKNSPATPGSGGVTQLEQNAAAAAATRQLPRKSQHKKKKG 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Srp72NP_650898.1 Spy 36..>347 CDD:443119 172/331 (52%)
TPR repeat 45..71 CDD:276809 14/25 (56%)
SRP_TPR_like 52..155 CDD:435703 60/114 (53%)
TPR repeat 75..101 CDD:276809 12/25 (48%)
LapB <321..515 CDD:442196 126/200 (63%)
SRP72 534..579 CDD:462494 25/59 (42%)
Srp72XP_321122.5 None

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