DRSC/TRiP Functional Genomics Resources

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Protein Alignment Septin2 and Tmem250

DIOPT Version :10

Sequence 1:NP_524417.1 Gene:Septin2 / 42438 FlyBaseID:FBgn0014029 Length:419 Species:Drosophila melanogaster
Sequence 2:NP_001119767.1 Gene:Tmem250 / 499758 RGDID:1564379 Length:139 Species:Rattus norvegicus


Alignment Length:75 Identity:16/75 - (21%)
Similarity:29/75 - (38%) Gaps:17/75 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 IHICLYFICPTGHGLKSL----------DLVCMKKLDSKVNIIPVIAKADTISKVELQRFKAKII 203
            |...|||.|       ||          .|.|::.|..:|.:...:..:..:..:..:|...:.:
  Rat    54 IRFLLYFSC-------SLFTAALWGALAALFCLQYLGVRVLLRFQLKLSVLLLLLGRRRVDFRFM 111

  Fly   204 QELNANGVHI 213
            .||...|:|:
  Rat   112 NELLIYGIHV 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Septin2NP_524417.1 CDC_Septin 40..308 CDD:206649 16/75 (21%)
PTZ00121 <285..393 CDD:173412
Tmem250NP_001119767.1 DUF5533 1..139 CDD:375254 16/75 (21%)
Blue background indicates that the domain is not in the aligned region.

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