DRSC/TRiP Functional Genomics Resources

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Protein Alignment EloB and elb-1

DIOPT Version :10

Sequence 1:NP_524416.1 Gene:EloB / 42435 FlyBaseID:FBgn0023212 Length:118 Species:Drosophila melanogaster
Sequence 2:NP_499517.1 Gene:elb-1 / 176605 WormBaseID:WBGene00001235 Length:118 Species:Caenorhabditis elegans


Alignment Length:115 Identity:41/115 - (35%)
Similarity:66/115 - (57%) Gaps:10/115 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DVFLMIRRQKTTIFTDAKENTTVAELKRMIEGILKVQPVD-QRLYNQDND-----VMEDDSTLQD 60
            ::|..:||.::.|:.||:|:.:|.|||.|:.||.: .||: ..|:..|.|     ::.|.:||.|
 Worm     5 ELFFEVRRNRSHIYLDAEESHSVMELKLMLAGITR-DPVNHMELWKLDEDGNKSQLLHDTATLSD 68

  Fly    61 YGVTVSTAKAQAPAQLGLTFRNEVGDFETLDMTPYSAPPDLPEVMKNQEA 110
            .|.:.:.||||.||.|||...|..   |.|.::..|..|.:|:.|:.::|
 Worm    69 AGFSSTNAKAQCPAALGLRLTNAE---EHLTISDVSTAPPIPDTMRQEQA 115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EloBNP_524416.1 Ubl_ElonginB 2..104 CDD:340486 39/107 (36%)
elb-1NP_499517.1 Ubl_ElonginB 5..109 CDD:340486 39/107 (36%)

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