DRSC/TRiP Functional Genomics Resources

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Protein Alignment EloB and LOC103691042

DIOPT Version :9

Sequence 1:NP_524416.1 Gene:EloB / 42435 FlyBaseID:FBgn0023212 Length:118 Species:Drosophila melanogaster
Sequence 2:XP_038953272.1 Gene:LOC103691042 / 103691042 RGDID:9421086 Length:150 Species:Rattus norvegicus


Alignment Length:114 Identity:50/114 - (43%)
Similarity:79/114 - (69%) Gaps:6/114 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DVFLMIRRQKTTIFTDAKENTTVAELKRMIEGILKVQPVDQRLYNQDNDVMEDDSTLQDYGVTVS 66
            |:||:|:..|||||||:||::||.:.|.:::|.||:|. :|||. ::|.::.|..||.:.|:|..
  Rat    42 DMFLIIQCSKTTIFTDSKESSTVFKQKHIVKGSLKLQE-EQRLC-KENQLLHDRKTLGECGITGQ 104

  Fly    67 TAKAQAPAQLGLTFR-NEVGDFETLDMTPYSAPPDLPEVMKNQEASNGQ 114
            .|..||||.:.|.|: ::|  ||.|.:.|:|:.|.||:|.::|: |.||
  Rat   105 RAGPQAPAIVCLAFQADDV--FEALHIEPFSSLPQLPDVTRSQD-SGGQ 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EloBNP_524416.1 Ubl_ElonginB 2..104 CDD:340486 45/102 (44%)
LOC103691042XP_038953272.1 Ubiquitin_like_fold 42..141 CDD:421700 45/102 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342339
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13248
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.030

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