DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5412 and FSH1

DIOPT Version :10

Sequence 1:NP_650895.1 Gene:CG5412 / 42434 FlyBaseID:FBgn0038806 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_011915.1 Gene:FSH1 / 856445 SGDID:S000001091 Length:243 Species:Saccharomyces cerevisiae


Alignment Length:245 Identity:61/245 - (24%)
Similarity:96/245 - (39%) Gaps:41/245 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 RVLCLHGYRQNGEAFKNKLGSFRKFANK-YAEFVFITAPHVAKALESAAEPVP-EQRSWWANKDD 94
            ::|.|||:.|||:.|..|....||...| ..:..:|.||.:   ||....|.. :...|.|..| 
Yeast     7 KLLFLHGFLQNGKVFSEKSSGIRKLLKKANVQCDYIDAPVL---LEKKDLPFEMDDEKWQATLD- 67

  Fly    95 GSFKGTNKG-------GPAFGFQESLRCVEEAWRTQGPFQGLLGFSQGACFVGLICGLAKKKLTS 152
               ...|:.       .......|.|:.|.:..:..||:.|::||||||....:|.... .:|..
Yeast    68 ---ADVNRAWFYHSEISHELDISEGLKSVVDHIKANGPYDGIVGFSQGAALSSIITNKI-SELVP 128

  Fly   153 IRPEF--AVLASGFL--------SGSLVHMSAYEEAISI------PTLHIYGQTDEIIPKEMSES 201
            ..|:|  :|:.||:.        .|.|.....:.::.::      ..:.|||.:|:.:|...|:.
Yeast   129 DHPQFKVSVVISGYSFTEPDPEHPGELRITEKFRDSFAVKPDMKTKMIFIYGASDQAVPSVRSKY 193

  Fly   202 LAARFKNAE--------VLEHSGGHYFPATAQQKQTFINFFQDRLQEYLE 243
            |...:..|:        ..||.|||..|......:..:......|||..|
Yeast   194 LYDIYLKAQNGNKEKVLAYEHPGGHMVPNKKDIIRPIVEQITSSLQEASE 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5412NP_650895.1 FSH1 28..229 CDD:461110 57/229 (25%)
FSH1NP_011915.1 FSH1 6..229 CDD:461110 57/229 (25%)

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