DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5412 and ovca2

DIOPT Version :10

Sequence 1:NP_650895.1 Gene:CG5412 / 42434 FlyBaseID:FBgn0038806 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_001107711.1 Gene:ovca2 / 100124959 XenbaseID:XB-GENE-978283 Length:230 Species:Xenopus tropicalis


Alignment Length:244 Identity:90/244 - (36%)
Similarity:131/244 - (53%) Gaps:23/244 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 AAVEAAGSSRASSSKQQLKLEITEKVRVLCLHGYRQNGEAFKNKLGSFRKFANKYAEFVFITAPH 70
            ||.|..|:::    |:.|        |||.|||||||..:|..:.|:.||.....|:.:..:||.
 Frog     2 AATETPGAAQ----KRVL--------RVLALHGYRQNERSFWERTGALRKRLRGRADLITFSAPL 54

  Fly    71 VA---KALESAAEP---VPEQRSWW-ANKDDGSFKGTNKGGPAFGFQESLRCVEEAWRTQGPFQG 128
            :.   .|...|.:|   ..|.|.|| :|.:..||....:.....|.:.||..|.:|:...|||.|
 Frog    55 LVPDPDAEPGAGDPDSLQDESRGWWFSNPEQNSFDAMEESKTCSGLEASLDTVAKAFSELGPFDG 119

  Fly   129 LLGFSQGACFVGLICGLAKKKLTSIRPEFAVLASGFLSGSLVHMSAYEEAISIPTLHIYGQTDEI 193
            :|||||||..|.:||.|.::.......:||:|.:||.|.|..|...|::.|::|:||:.|:||.:
 Frog   120 ILGFSQGAALVAIICALKQQGDPRFHFDFAILVAGFKSLSTDHAKHYQQPITVPSLHVIGETDRV 184

  Fly   194 IPKEMSESLAARFKNAEVLEHSGGHYFPATAQQKQTFINFFQDRLQEYL 242
            |...||:.|.:.|:|..:|.||||||.||.|.||:.:..|    |.::|
 Frog   185 ISAAMSQELVSHFENPVILMHSGGHYVPACAPQKKVYWEF----LDKFL 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5412NP_650895.1 FSH1 28..229 CDD:461110 81/207 (39%)
ovca2NP_001107711.1 FSH1 15..218 CDD:461110 80/210 (38%)

Return to query results.
Submit another query.