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Protein Alignment TFAM and Hmgb2
DIOPT Version :9
Sequence 1: | NP_732527.1 |
Gene: | TFAM / 42433 |
FlyBaseID: | FBgn0038805 |
Length: | 284 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001350372.1 |
Gene: | Hmgb2 / 97165 |
MGIID: | 96157 |
Length: | 210 |
Species: | Mus musculus |
Alignment Length: | 194 |
Identity: | 48/194 - (24%) |
Similarity: | 77/194 - (39%) |
Gaps: | 46/194 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 73 GLPPRPKKPLTPYFRFMREQRPKLKAANP--QITTVEVVRQLSKNWSDADAQLKERLQAEFKRDQ 135
|.|.:|:..::.|..|::..|.:.|..:| .:...|..::.|:.|....|:.|.:.:...|.|:
Mouse 4 GDPNKPRGKMSSYAFFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDLAKSDK 68
Fly 136 QIYVEERTKYDATLTEEQRAEIKQLKQDLVDAKERRQLRKRVKELGRPKKPASAFLRFIASER-- 198
..|..|...| |..|..::.:| |:...||:|.|||..|.:..|
Mouse 69 ARYDREMKNY-------------------VPPKGDKKGKK--KDPNAPKRPPSAFFLFCSENRPK 112
Fly 199 --INTPQ---GDKQTYREWHQKTTAK-----WTRLSDSEKEVYMQESRKEMELYRKAISVWEEK 252
|..|. || ||| |:..|..:|:.|.|::.|..|.|.|.|:.:..|
Mouse 113 IKIEHPGLSIGD-----------TAKKLGEMWSEQSAKDKQPYEQKAAKLKEKYEKDIAAYRAK 165
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5648 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1641977at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR48112 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.920 |
|
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