Protein Alignment TFAM and HMGB2

DIOPT Version :9

• Sequence 1: NP_732527.1
• Gene: TFAM / 42433
• FlyBaseID: FBgn0038805
• Length: 284
• Species: Drosophila melanogaster
• Sequence 2: NP_564123.1
• Gene: HMGB2 / 838658
• AraportID: AT1G20693
• Length: 144
• Species: Arabidopsis thaliana
• Alignment Length: 114
• Identity: 31/114 - (27%)
• Similarity: 54/114 - (47%)
• Gaps: 21/114 - (18%)

  Fly   150 TEEQRAEIKQLKQDLVDAKERRQLRKRVKELGRPKKPASAFLRFIASERINTPQGDKQTYREWHQ 214
            ||.:.:::...|:   .||...:.:...|:..:||:|||||..|:...|        :|:::.:.
plant     8 TETRSSKLSVTKK---PAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFR--------ETFKKENP 61

  Fly   215 KTTA----------KWTRLSDSEKEVYMQESRKEMELYRKAISVWEEKM 253
            |..:          ||..||||||..|:.::.|....|.|.|..:.:|:
plant    62 KNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKL 110

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TFAM	NP_732527.1	HMGB-UBF_HMG-box	78..142	CDD:238686
		HMGB-UBF_HMG-box	183..247	CDD:238686	23/73 (32%)
HMGB2	NP_564123.1	HMG_box	38..106	CDD:395407	24/75 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820