Protein Alignment TFAM and HMGB5

DIOPT Version :9

• Sequence 1: NP_732527.1
• Gene: TFAM / 42433
• FlyBaseID: FBgn0038805
• Length: 284
• Species: Drosophila melanogaster
• Sequence 2: NP_001329802.1
• Gene: HMGB5 / 829709
• AraportID: AT4G35570
• Length: 125
• Species: Arabidopsis thaliana
• Alignment Length: 105
• Identity: 29/105 - (27%)
• Similarity: 48/105 - (45%)
• Gaps: 19/105 - (18%)

  Fly    59 NTPAVPSKTLEEQLGL-----------PPRPKKPLTPYFRFMREQRPKLKAANPQITTV-EVVRQ 111
            |...|.|::.:::|.:           |.|||||.:|:|.|:.:.|.:...|||...:| .|.|.
plant     4 NQTEVESRSTDDRLKVRGNKVGKKTKDPNRPKKPPSPFFVFLDDFRKEFNLANPDNKSVGNVGRA 68

  Fly   112 LSKNWSDADAQLKERLQAEFKRDQQIYVEERTKYDATLTE 151
            ..|.|.    .:.|..:|.|....|   .::|:|..|:.:
plant    69 AGKKWK----TMTEEERAPFVAKSQ---SKKTEYAVTMQQ 101

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TFAM	NP_732527.1	HMGB-UBF_HMG-box	78..142	CDD:238686	20/64 (31%)
		HMGB-UBF_HMG-box	183..247	CDD:238686
HMGB5	NP_001329802.1	HMGB-UBF_HMG-box	34..100	CDD:238686	23/72 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910