Protein Alignment TFAM and HMGB4

DIOPT Version :9

• Sequence 1: NP_732527.1
• Gene: TFAM / 42433
• FlyBaseID: FBgn0038805
• Length: 284
• Species: Drosophila melanogaster
• Sequence 2: NP_001031364.2
• Gene: HMGB4 / 816263
• AraportID: AT2G17560
• Length: 138
• Species: Arabidopsis thaliana
• Alignment Length: 113
• Identity: 24/113 - (21%)
• Similarity: 51/113 - (45%)
• Gaps: 13/113 - (11%)

  Fly   143 TKYDATLTEEQRAEIKQLKQDLVDAKERRQLRKRVKELGRPKKPASAFLRFIASER--INTPQGD 205
            :|.:||.|:::           :..:.|:..:|..|:..:||:|.|||..|:...|  .|....:
plant     6 SKAEATSTDQR-----------LKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPN 59

  Fly   206 KQTYREWHQKTTAKWTRLSDSEKEVYMQESRKEMELYRKAISVWEEKM 253
            .::.....:...|:|..::|.:|..|:.::......|.|.:..:..|:
plant    60 NKSVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKL 107

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TFAM	NP_732527.1	HMGB-UBF_HMG-box	78..142	CDD:238686
		HMGB-UBF_HMG-box	183..247	CDD:238686	16/65 (25%)
HMGB4	NP_001031364.2	HMG_box	35..103	CDD:278906	16/67 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910