Protein Alignment TFAM and LOC688702

DIOPT Version :9

• Sequence 1: NP_732527.1
• Gene: TFAM / 42433
• FlyBaseID: FBgn0038805
• Length: 284
• Species: Drosophila melanogaster
• Sequence 2: XP_006257650.1
• Gene: LOC688702 / 688702
• RGDID: 1585304
• Length: 168
• Species: Rattus norvegicus
• Alignment Length: 187
• Identity: 48/187 - (25%)
• Similarity: 72/187 - (38%)
• Gaps: 55/187 - (29%)

  Fly    77 RPKKPLTPYFRFM-------REQRPKLKAANPQITTVEVVRQLSKNWSDADAQLKERLQAEFKRD 134
            |||..::||..||       |||:|     |......|..|:.|:.|.....:.|::.:|..|||
  Rat     8 RPKVNVSPYVHFMMDFRNQTREQQP-----NTYYDFTEFSRKCSEKWRTISKKEKKKYEALAKRD 67

  Fly   135 QQIYVEERTKYDATLTEEQRAEIKQLKQDLVDAKERRQLRKRVKELGRPKKPASAFLRFIAS--E 197
            :..|..|...|..                     .||:.|:|  :...|:||.|:||.|...  :
  Rat    68 KDRYQREMRNYSG---------------------PRRERRRR--DPDAPRKPPSSFLLFSQDHFD 109

  Fly   198 RINTPQGDKQTYREWHQKTTAK-----WTRLSDSEKEVYMQESR-------KEMELY 242
            .|      |:.:..|.....||     |.|.|:::|..|.:.:.       :|.|.|
  Rat   110 EI------KEQHPNWTVAQVAKAAGRMWARCSEADKIPYEERAAVLRAKYLEEREAY 160

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TFAM	NP_732527.1	HMGB-UBF_HMG-box	78..142	CDD:238686	21/70 (30%)
		HMGB-UBF_HMG-box	183..247	CDD:238686	20/74 (27%)
LOC688702	XP_006257650.1	HMGB-UBF_HMG-box	9..76	CDD:238686	22/71 (31%)
		HMGB-UBF_HMG-box	95..158	CDD:238686	17/68 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1641977at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010