Protein Alignment TFAM and LOC681067

DIOPT Version :9

• Sequence 1: NP_732527.1
• Gene: TFAM / 42433
• FlyBaseID: FBgn0038805
• Length: 284
• Species: Drosophila melanogaster
• Sequence 2: XP_006257578.1
• Gene: LOC681067 / 681067
• RGDID: 1584677
• Length: 168
• Species: Rattus norvegicus
• Alignment Length: 182
• Identity: 47/182 - (25%)
• Similarity: 73/182 - (40%)
• Gaps: 45/182 - (24%)

  Fly    77 RPKKPLTPYFRFMREQRPKLKAANPQI--TTVEVVRQLSKNWSDADAQLKERLQAEFKRDQQIYV 139
            |||..::||..||.:.|.:::...|.|  ...|..|:.|:.|.....:.|::.:|..|||:..|.
  Rat     8 RPKVNVSPYVHFMMDFRNQMREQQPNIYYDFTEFSRKCSEKWKTISKKEKKKYEALAKRDKDRYQ 72

  Fly   140 EERTKYDATLTEEQRAEIKQLKQDLVDAKERRQLRKRVKELGRPKKPASAFLRFIAS--ERINTP 202
            .|...|..                     .||:.|:|  :...|:||.|:||.|...  |.|
  Rat    73 REMRNYSG---------------------PRRERRRR--DADAPRKPPSSFLLFSQDHFEEI--- 111

  Fly   203 QGDKQTYREWHQKTTAK-----WTRLSDSEKEVYMQESR-------KEMELY 242
               |:.:..|.....||     |.|.|:::|..|.:.:.       :|.|.|
  Rat   112 ---KEQHPNWTVGQVAKAAGRMWARCSEADKIPYEERAAVLRAKYLEEREAY 160

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TFAM	NP_732527.1	HMGB-UBF_HMG-box	78..142	CDD:238686	19/65 (29%)
		HMGB-UBF_HMG-box	183..247	CDD:238686	21/74 (28%)
LOC681067	XP_006257578.1	HMGB-UBF_HMG-box	9..76	CDD:238686	20/66 (30%)
		HMGB-UBF_HMG-box	95..158	CDD:238686	18/68 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR48112
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.100