DRSC/TRiP Functional Genomics Resources

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Protein Alignment TFAM and tox

DIOPT Version :9

Sequence 1:NP_732527.1 Gene:TFAM / 42433 FlyBaseID:FBgn0038805 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_001243623.1 Gene:tox / 569666 ZFINID:ZDB-GENE-070912-181 Length:540 Species:Danio rerio


Alignment Length:153 Identity:34/153 - (22%)
Similarity:65/153 - (42%) Gaps:23/153 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 DPSRANDTDHRPLTPPRPLAAASISNTPAVPSKTLEEQLGLPPRPKKPLTPYFRFMREQRPKLKA 98
            |.::.|..:.|        ||..::..|..|.|..::.   |..|:||::.|..|.|:.:..:|.
Zfish   256 DAAKINGAEKR--------AATDMAKKPKTPKKKKKKD---PNEPQKPVSAYALFFRDTQAAIKG 309

  Fly    99 ANPQITTVEVVRQLSKNWSDADAQLKERLQAEFKRDQQIYVEERTKYDATLTEEQRAEIKQLKQD 163
            .||..|..||.:.::..|.....:.|:..:.:.:..::.|:::...|.|:|       :.|...|
Zfish   310 QNPNATFGEVSKIVASMWDGLGEEQKQVYKKKTETAKKEYLKQLAAYRASL-------VSQSYND 367

  Fly   164 LVDAKERRQLRKRVKELGRPKKP 186
            ..|.|     ..:..::..||.|
Zfish   368 PGDVK-----ASQASQMLGPKPP 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TFAMNP_732527.1 HMGB-UBF_HMG-box 78..142 CDD:238686 15/63 (24%)
HMGB-UBF_HMG-box 183..247 CDD:238686 3/4 (75%)
toxNP_001243623.1 HMG-box 289..>338 CDD:238037 14/48 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5648
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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