Protein Alignment TFAM and sox13

DIOPT Version :9

• Sequence 1: NP_732527.1
• Gene: TFAM / 42433
• FlyBaseID: FBgn0038805
• Length: 284
• Species: Drosophila melanogaster
• Sequence 2: NP_001352418.1
• Gene: sox13 / 555983
• ZFINID: ZDB-GENE-100519-1
• Length: 597
• Species: Danio rerio
• Alignment Length: 289
• Identity: 61/289 - (21%)
• Similarity: 101/289 - (34%)
• Gaps: 94/289 - (32%)

  Fly    49 PRPLAAASISNTPAVPSKTLEEQLGLP--PRPKKPLTPYFRFMREQRPKLKAANPQITTVE---- 107
            |..:..|...|...:| .|.|.|:|||  |.|.||:         :.|.....||..|.|:
Zfish   222 PYVMIPAFHPNAQPLP-VTSEAQMGLPLQPIPCKPV---------EYPMQLLPNPHSTPVKRSSG 276

  Fly   108 -VVRQLSKNWSDADAQLK---------ERLQAEFK-RD----------------------QQIYV 139
             |.||.:....:..|:.|         ..||:.:: ||                      |.|:.
Zfish   277 TVYRQDTSQPLNLTAKPKTPSPQALELAHLQSGYRHRDLPQSPPRSALSLSFLGEGDVVTQAIHD 341

  Fly   140 EE-----------RTKYDATLTEEQRAEI----KQLKQDLVDAKERRQL---------RKRVKEL 180
            .:           |.:.:.|..|..|..:    .:..:|...:....|:         ..|....
Zfish   342 AQQLLRGGQSSTGRERDNNTRLEASRDRMDDGHSRTNEDHHSSDSEGQMAISGVGSFGESRTPSS 406

  Fly   181 GRPKKPASAFLRFIASERINTPQGDKQTYREWHQKTTAK-----WTRLSDSEKEVYMQE----SR 236
            |..|:|.:||:.:...||    :...|.:.:.|..:.:|     |..:|:.||:.|.:|    ||
Zfish   407 GHIKRPMNAFMVWAKDER----RRILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLSR 467

  Fly   237 KEMELY--------RKAISVWEEKMIRLG 257
            :.:|.|        .|...:.|.:.:|:|
Zfish   468 QHLERYPDYKYKPRPKRTCIVEGRRLRVG 496

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TFAM	NP_732527.1	HMGB-UBF_HMG-box	78..142	CDD:238686	19/111 (17%)
		HMGB-UBF_HMG-box	183..247	CDD:238686	20/80 (25%)
sox13	NP_001352418.1	SOX-TCF_HMG-box	408..479	CDD:238684	19/74 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910